Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 AC022517.1-201ENST00000592429 346 ntBASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV41A0A0B4J266 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
TRAV41A0A0B4J266 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
TRAV41A0A0B4J266 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV41A0A0B4J266 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV41A0A0B4J266 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 AC061975.6-201ENST00000579045 1553 ntBASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 KRT18P11-201ENST00000435214 1283 ntBASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV41A0A0B4J266 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV41A0A0B4J266 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 Z98882.1-201ENST00000622160 2253 ntBASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 KRT16P2-201ENST00000414673 1423 ntBASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 UBE2DNL-204ENST00000602536 740 ntBASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV41A0A0B4J266 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 SLC7A5P2-201ENST00000553010 536 ntBASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms