Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 AC004687.1-201ENST00000579003 1625 ntBASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV9-1A0A075B6T8 AC099778.1-201ENST00000568593 1911 ntBASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 AC026471.1-201ENST00000564629 3026 ntBASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV9-1A0A075B6T8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 AC007225.1-201ENST00000566331 1836 ntBASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV9-1A0A075B6T8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms