Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SLC25A28Q96A46 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
SLC25A28Q96A46 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC25A28Q96A46 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC25A28Q96A46 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC25A28Q96A46 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC25A28Q96A46 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC25A28Q96A46 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC25A28Q96A46 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC25A28Q96A46 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SLC25A28Q96A46 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC25A28Q96A46 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC25A28Q96A46 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC25A28Q96A46 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SLC25A28Q96A46 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC25A28Q96A46 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC25A28Q96A46 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.08■■□□□ 1.28
SLC25A28Q96A46 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC25A28Q96A46 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC25A28Q96A46 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC25A28Q96A46 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SLC25A28Q96A46 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC25A28Q96A46 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC25A28Q96A46 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SLC25A28Q96A46 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC25A28Q96A46 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC25A28Q96A46 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC25A28Q96A46 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SLC25A28Q96A46 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC25A28Q96A46 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SLC25A28Q96A46 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC25A28Q96A46 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
SLC25A28Q96A46 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SLC25A28Q96A46 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC25A28Q96A46 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SLC25A28Q96A46 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.01■■□□□ 1.27
SLC25A28Q96A46 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
SLC25A28Q96A46 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC25A28Q96A46 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC25A28Q96A46 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23■■□□□ 1.27
SLC25A28Q96A46 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC25A28Q96A46 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC25A28Q96A46 AL135925.1-201ENST00000605920 1701 ntBASIC22.99■■□□□ 1.27
SLC25A28Q96A46 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SLC25A28Q96A46 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SLC25A28Q96A46 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SLC25A28Q96A46 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SLC25A28Q96A46 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SLC25A28Q96A46 AC097358.2-201ENST00000607541 1159 ntBASIC22.96■■□□□ 1.27
SLC25A28Q96A46 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
SLC25A28Q96A46 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SLC25A28Q96A46 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SLC25A28Q96A46 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
SLC25A28Q96A46 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.94■■□□□ 1.26
SLC25A28Q96A46 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SLC25A28Q96A46 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SLC25A28Q96A46 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SLC25A28Q96A46 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.93■■□□□ 1.26
SLC25A28Q96A46 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SLC25A28Q96A46 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.92■■□□□ 1.26
SLC25A28Q96A46 SETD8P1-201ENST00000623146 1180 ntBASIC22.92■■□□□ 1.26
SLC25A28Q96A46 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.92■■□□□ 1.26
SLC25A28Q96A46 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.92■■□□□ 1.26
SLC25A28Q96A46 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SLC25A28Q96A46 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC25A28Q96A46 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC25A28Q96A46 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SLC25A28Q96A46 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC25A28Q96A46 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SLC25A28Q96A46 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SLC25A28Q96A46 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SLC25A28Q96A46 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SLC25A28Q96A46 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
SLC25A28Q96A46 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SLC25A28Q96A46 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SLC25A28Q96A46 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.87■■□□□ 1.25
SLC25A28Q96A46 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
SLC25A28Q96A46 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC25A28Q96A46 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC25A28Q96A46 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
SLC25A28Q96A46 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC25A28Q96A46 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.84■■□□□ 1.25
SLC25A28Q96A46 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC25A28Q96A46 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.84■■□□□ 1.25
SLC25A28Q96A46 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC25A28Q96A46 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC25A28Q96A46 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC25A28Q96A46 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC25A28Q96A46 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.83■■□□□ 1.24
SLC25A28Q96A46 AC142086.6-201ENST00000621154 1765 ntBASIC22.83■■□□□ 1.24
SLC25A28Q96A46 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SLC25A28Q96A46 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC25A28Q96A46 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC25A28Q96A46 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC25A28Q96A46 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC25A28Q96A46 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC25A28Q96A46 AC136428.2-201ENST00000563187 214 ntBASIC22.8■■□□□ 1.24
SLC25A28Q96A46 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC25A28Q96A46 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.79■■□□□ 1.24
SLC25A28Q96A46 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms