Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pcdhgc5Q91XW9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Pcdhgc5Q91XW9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pcdhgc5Q91XW9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhgc5Q91XW9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.27■■■□□ 2.12
Pcdhgc5Q91XW9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.27■■■□□ 2.12
Pcdhgc5Q91XW9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhgc5Q91XW9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Pcdhgc5Q91XW9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Pcdhgc5Q91XW9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Pcdhgc5Q91XW9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pcdhgc5Q91XW9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
Pcdhgc5Q91XW9 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.22■■■□□ 2.11
Pcdhgc5Q91XW9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.21■■■□□ 2.11
Pcdhgc5Q91XW9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.21■■■□□ 2.11
Pcdhgc5Q91XW9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pcdhgc5Q91XW9 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.2■■■□□ 2.1
Pcdhgc5Q91XW9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhgc5Q91XW9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhgc5Q91XW9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhgc5Q91XW9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdhgc5Q91XW9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhgc5Q91XW9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhgc5Q91XW9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhgc5Q91XW9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhgc5Q91XW9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
Pcdhgc5Q91XW9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Pcdhgc5Q91XW9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
Pcdhgc5Q91XW9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Pcdhgc5Q91XW9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Pcdhgc5Q91XW9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Pcdhgc5Q91XW9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.13■■■□□ 2.09
Pcdhgc5Q91XW9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pcdhgc5Q91XW9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pcdhgc5Q91XW9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Pcdhgc5Q91XW9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Pcdhgc5Q91XW9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pcdhgc5Q91XW9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pcdhgc5Q91XW9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.11■■■□□ 2.09
Pcdhgc5Q91XW9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pcdhgc5Q91XW9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pcdhgc5Q91XW9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhgc5Q91XW9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhgc5Q91XW9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.06■■■□□ 2.08
Pcdhgc5Q91XW9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhgc5Q91XW9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhgc5Q91XW9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.05■■■□□ 2.08
Pcdhgc5Q91XW9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhgc5Q91XW9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhgc5Q91XW9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhgc5Q91XW9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Pcdhgc5Q91XW9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Pcdhgc5Q91XW9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.01■■■□□ 2.07
Pcdhgc5Q91XW9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Pcdhgc5Q91XW9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28■■■□□ 2.07
Pcdhgc5Q91XW9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28■■■□□ 2.07
Pcdhgc5Q91XW9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Pcdhgc5Q91XW9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Pcdhgc5Q91XW9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhgc5Q91XW9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Pcdhgc5Q91XW9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Pcdhgc5Q91XW9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Pcdhgc5Q91XW9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.98■■■□□ 2.07
Pcdhgc5Q91XW9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pcdhgc5Q91XW9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pcdhgc5Q91XW9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pcdhgc5Q91XW9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pcdhgc5Q91XW9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pcdhgc5Q91XW9 Nkain2-201ENSMUST00000092602 558 ntBASIC27.96■■■□□ 2.07
Pcdhgc5Q91XW9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.96■■■□□ 2.07
Pcdhgc5Q91XW9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.96■■■□□ 2.07
Pcdhgc5Q91XW9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.07
Pcdhgc5Q91XW9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.94■■■□□ 2.06
Pcdhgc5Q91XW9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdhgc5Q91XW9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdhgc5Q91XW9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdhgc5Q91XW9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Pcdhgc5Q91XW9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhgc5Q91XW9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pcdhgc5Q91XW9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pcdhgc5Q91XW9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pcdhgc5Q91XW9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pcdhgc5Q91XW9 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.89■■■□□ 2.06
Pcdhgc5Q91XW9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.88■■■□□ 2.05
Pcdhgc5Q91XW9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Pcdhgc5Q91XW9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Pcdhgc5Q91XW9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Pcdhgc5Q91XW9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pcdhgc5Q91XW9 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.87■■■□□ 2.05
Pcdhgc5Q91XW9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pcdhgc5Q91XW9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pcdhgc5Q91XW9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.85■■■□□ 2.05
Pcdhgc5Q91XW9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdhgc5Q91XW9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdhgc5Q91XW9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
Pcdhgc5Q91XW9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Pcdhgc5Q91XW9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Pcdhgc5Q91XW9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Pcdhgc5Q91XW9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.81■■■□□ 2.04
Pcdhgc5Q91XW9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms