Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Nkain2-201ENSMUST00000092602 558 ntBASIC29.05■■■□□ 2.24
Usp33Q8R5K2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Usp33Q8R5K2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Usp33Q8R5K2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.03■■■□□ 2.24
Usp33Q8R5K2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Usp33Q8R5K2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Usp33Q8R5K2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.01■■■□□ 2.23
Usp33Q8R5K2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
Usp33Q8R5K2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Usp33Q8R5K2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
Usp33Q8R5K2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.97■■■□□ 2.23
Usp33Q8R5K2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Usp33Q8R5K2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Usp33Q8R5K2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Usp33Q8R5K2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp33Q8R5K2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Usp33Q8R5K2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp33Q8R5K2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
Usp33Q8R5K2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Usp33Q8R5K2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Usp33Q8R5K2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Usp33Q8R5K2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.94■■■□□ 2.22
Usp33Q8R5K2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.94■■■□□ 2.22
Usp33Q8R5K2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Usp33Q8R5K2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp33Q8R5K2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp33Q8R5K2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Usp33Q8R5K2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Usp33Q8R5K2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
Usp33Q8R5K2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Usp33Q8R5K2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Usp33Q8R5K2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Usp33Q8R5K2 Gm7432-201ENSMUST00000210343 879 ntBASIC28.86■■■□□ 2.21
Usp33Q8R5K2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Usp33Q8R5K2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Usp33Q8R5K2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Usp33Q8R5K2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Usp33Q8R5K2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Usp33Q8R5K2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Usp33Q8R5K2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
Usp33Q8R5K2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Usp33Q8R5K2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Usp33Q8R5K2 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.81■■■□□ 2.2
Usp33Q8R5K2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Usp33Q8R5K2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Usp33Q8R5K2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Usp33Q8R5K2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Usp33Q8R5K2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Usp33Q8R5K2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
Usp33Q8R5K2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
Usp33Q8R5K2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
Usp33Q8R5K2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.72■■■□□ 2.19
Usp33Q8R5K2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
Usp33Q8R5K2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Usp33Q8R5K2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Usp33Q8R5K2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.7■■■□□ 2.18
Usp33Q8R5K2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Usp33Q8R5K2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Usp33Q8R5K2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.69■■■□□ 2.18
Usp33Q8R5K2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Usp33Q8R5K2 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.67■■■□□ 2.18
Usp33Q8R5K2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Usp33Q8R5K2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Usp33Q8R5K2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Usp33Q8R5K2 Gm11599-201ENSMUST00000118720 878 ntBASIC28.64■■■□□ 2.18
Usp33Q8R5K2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
Usp33Q8R5K2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Usp33Q8R5K2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Usp33Q8R5K2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Usp33Q8R5K2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Usp33Q8R5K2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.61■■■□□ 2.17
Usp33Q8R5K2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Usp33Q8R5K2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Usp33Q8R5K2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Usp33Q8R5K2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.59■■■□□ 2.17
Usp33Q8R5K2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Usp33Q8R5K2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.59■■■□□ 2.17
Usp33Q8R5K2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Usp33Q8R5K2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Usp33Q8R5K2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Usp33Q8R5K2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.56■■■□□ 2.16
Usp33Q8R5K2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Usp33Q8R5K2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Usp33Q8R5K2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.53■■■□□ 2.16
Usp33Q8R5K2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Usp33Q8R5K2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Usp33Q8R5K2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.49■■■□□ 2.15
Usp33Q8R5K2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Usp33Q8R5K2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Usp33Q8R5K2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.48■■■□□ 2.15
Usp33Q8R5K2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.48■■■□□ 2.15
Usp33Q8R5K2 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.46■■■□□ 2.15
Usp33Q8R5K2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Usp33Q8R5K2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Usp33Q8R5K2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.41■■■□□ 2.14
Usp33Q8R5K2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Usp33Q8R5K2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.4■■■□□ 2.14
Usp33Q8R5K2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Usp33Q8R5K2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Usp33Q8R5K2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms