Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC32.47■■■□□ 2.79
Abca3Q8R420 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Abca3Q8R420 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC32.46■■■□□ 2.79
Abca3Q8R420 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Abca3Q8R420 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
Abca3Q8R420 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
Abca3Q8R420 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Abca3Q8R420 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Abca3Q8R420 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Abca3Q8R420 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Abca3Q8R420 Nkain2-201ENSMUST00000092602 558 ntBASIC32.4■■■□□ 2.78
Abca3Q8R420 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Abca3Q8R420 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Abca3Q8R420 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Abca3Q8R420 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Abca3Q8R420 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Abca3Q8R420 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
Abca3Q8R420 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Abca3Q8R420 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Abca3Q8R420 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Abca3Q8R420 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
Abca3Q8R420 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Abca3Q8R420 Gm30346-201ENSMUST00000218641 1699 ntBASIC32.31■■■□□ 2.76
Abca3Q8R420 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Abca3Q8R420 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Abca3Q8R420 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC32.3■■■□□ 2.76
Abca3Q8R420 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.29■■■□□ 2.76
Abca3Q8R420 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Abca3Q8R420 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Abca3Q8R420 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Abca3Q8R420 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Abca3Q8R420 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC32.26■■■□□ 2.76
Abca3Q8R420 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Abca3Q8R420 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Abca3Q8R420 Gm7432-201ENSMUST00000210343 879 ntBASIC32.24■■■□□ 2.75
Abca3Q8R420 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Abca3Q8R420 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC32.24■■■□□ 2.75
Abca3Q8R420 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Abca3Q8R420 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Abca3Q8R420 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC32.21■■■□□ 2.75
Abca3Q8R420 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
Abca3Q8R420 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Abca3Q8R420 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Abca3Q8R420 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Abca3Q8R420 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Abca3Q8R420 Gm11599-201ENSMUST00000118720 878 ntBASIC32.17■■■□□ 2.74
Abca3Q8R420 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC32.17■■■□□ 2.74
Abca3Q8R420 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Abca3Q8R420 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Abca3Q8R420 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
Abca3Q8R420 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Abca3Q8R420 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Abca3Q8R420 Gm11175-201ENSMUST00000116172 543 ntBASIC32.14■■■□□ 2.74
Abca3Q8R420 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Abca3Q8R420 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Abca3Q8R420 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Abca3Q8R420 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Abca3Q8R420 Mir6538-201ENSMUST00000183713 110 ntBASIC32.12■■■□□ 2.73
Abca3Q8R420 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC32.12■■■□□ 2.73
Abca3Q8R420 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Abca3Q8R420 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC32.1■■■□□ 2.73
Abca3Q8R420 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Abca3Q8R420 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC32.09■■■□□ 2.73
Abca3Q8R420 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Abca3Q8R420 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC32.07■■■□□ 2.72
Abca3Q8R420 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Abca3Q8R420 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC32.03■■■□□ 2.72
Abca3Q8R420 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Abca3Q8R420 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Abca3Q8R420 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Abca3Q8R420 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Abca3Q8R420 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
Abca3Q8R420 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.98■■■□□ 2.71
Abca3Q8R420 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Abca3Q8R420 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Abca3Q8R420 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Abca3Q8R420 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Abca3Q8R420 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Abca3Q8R420 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.94■■■□□ 2.7
Abca3Q8R420 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Abca3Q8R420 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Abca3Q8R420 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Abca3Q8R420 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.93■■■□□ 2.7
Abca3Q8R420 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Abca3Q8R420 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.92■■■□□ 2.7
Abca3Q8R420 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Abca3Q8R420 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Abca3Q8R420 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
Abca3Q8R420 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Abca3Q8R420 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
Abca3Q8R420 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Abca3Q8R420 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Abca3Q8R420 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.86■■■□□ 2.69
Abca3Q8R420 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Abca3Q8R420 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
Abca3Q8R420 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.84■■■□□ 2.69
Abca3Q8R420 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.82■■■□□ 2.68
Abca3Q8R420 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Abca3Q8R420 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Abca3Q8R420 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms