Protein–RNA interactions for Protein: Q8K1S1

Lgi4, Leucine-rich repeat LGI family member 4, mousemouse

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi4Q8K1S1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Lgi4Q8K1S1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Lgi4Q8K1S1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.59■■□□□ 1.53
Lgi4Q8K1S1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Lgi4Q8K1S1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.57■■□□□ 1.52
Lgi4Q8K1S1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Lgi4Q8K1S1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Lgi4Q8K1S1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lgi4Q8K1S1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Lgi4Q8K1S1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Lgi4Q8K1S1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Lgi4Q8K1S1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lgi4Q8K1S1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Lgi4Q8K1S1 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.52■■□□□ 1.52
Lgi4Q8K1S1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
Lgi4Q8K1S1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.51■■□□□ 1.51
Lgi4Q8K1S1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.5■■□□□ 1.51
Lgi4Q8K1S1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.5■■□□□ 1.51
Lgi4Q8K1S1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Lgi4Q8K1S1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Lgi4Q8K1S1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Lgi4Q8K1S1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lgi4Q8K1S1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Lgi4Q8K1S1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lgi4Q8K1S1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lgi4Q8K1S1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lgi4Q8K1S1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Lgi4Q8K1S1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Lgi4Q8K1S1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Lgi4Q8K1S1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.46■■□□□ 1.51
Lgi4Q8K1S1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Lgi4Q8K1S1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lgi4Q8K1S1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Lgi4Q8K1S1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lgi4Q8K1S1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lgi4Q8K1S1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lgi4Q8K1S1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Lgi4Q8K1S1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lgi4Q8K1S1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lgi4Q8K1S1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Lgi4Q8K1S1 Gm11599-201ENSMUST00000118720 878 ntBASIC24.41■■□□□ 1.5
Lgi4Q8K1S1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.4■■□□□ 1.5
Lgi4Q8K1S1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lgi4Q8K1S1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.4■■□□□ 1.5
Lgi4Q8K1S1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Lgi4Q8K1S1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Lgi4Q8K1S1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.37■■□□□ 1.49
Lgi4Q8K1S1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Lgi4Q8K1S1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Lgi4Q8K1S1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lgi4Q8K1S1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.35■■□□□ 1.49
Lgi4Q8K1S1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.34■■□□□ 1.49
Lgi4Q8K1S1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lgi4Q8K1S1 Mir6538-201ENSMUST00000183713 110 ntBASIC24.33■■□□□ 1.49
Lgi4Q8K1S1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Lgi4Q8K1S1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Lgi4Q8K1S1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lgi4Q8K1S1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lgi4Q8K1S1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Lgi4Q8K1S1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.3■■□□□ 1.48
Lgi4Q8K1S1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Lgi4Q8K1S1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Lgi4Q8K1S1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Lgi4Q8K1S1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Lgi4Q8K1S1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Lgi4Q8K1S1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.28■■□□□ 1.48
Lgi4Q8K1S1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lgi4Q8K1S1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lgi4Q8K1S1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Lgi4Q8K1S1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Lgi4Q8K1S1 Gm11175-201ENSMUST00000116172 543 ntBASIC24.26■■□□□ 1.47
Lgi4Q8K1S1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lgi4Q8K1S1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lgi4Q8K1S1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lgi4Q8K1S1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Lgi4Q8K1S1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Lgi4Q8K1S1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Lgi4Q8K1S1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Lgi4Q8K1S1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Lgi4Q8K1S1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Lgi4Q8K1S1 Cap2-205ENSMUST00000225824 1634 ntBASIC24.2■■□□□ 1.46
Lgi4Q8K1S1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.2■■□□□ 1.46
Lgi4Q8K1S1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Lgi4Q8K1S1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lgi4Q8K1S1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lgi4Q8K1S1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Lgi4Q8K1S1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Lgi4Q8K1S1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Lgi4Q8K1S1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
Lgi4Q8K1S1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.17■■□□□ 1.46
Lgi4Q8K1S1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Lgi4Q8K1S1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Lgi4Q8K1S1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Lgi4Q8K1S1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Lgi4Q8K1S1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.15■■□□□ 1.46
Lgi4Q8K1S1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Lgi4Q8K1S1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Lgi4Q8K1S1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lgi4Q8K1S1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.14■■□□□ 1.45
Lgi4Q8K1S1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms