Protein–RNA interactions for Protein: Q8BX32

Slx1b, Structure-specific endonuclease subunit SLX1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx1bQ8BX32 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC33.48■■■□□ 2.95
Slx1bQ8BX32 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC33.48■■■□□ 2.95
Slx1bQ8BX32 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
Slx1bQ8BX32 Gm7432-201ENSMUST00000210343 879 ntBASIC33.47■■■□□ 2.95
Slx1bQ8BX32 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
Slx1bQ8BX32 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC33.46■■■□□ 2.95
Slx1bQ8BX32 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
Slx1bQ8BX32 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Slx1bQ8BX32 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Slx1bQ8BX32 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Slx1bQ8BX32 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Slx1bQ8BX32 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Slx1bQ8BX32 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC33.38■■■□□ 2.93
Slx1bQ8BX32 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Slx1bQ8BX32 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC33.37■■■□□ 2.93
Slx1bQ8BX32 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Slx1bQ8BX32 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC33.34■■■□□ 2.93
Slx1bQ8BX32 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Slx1bQ8BX32 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC33.34■■■□□ 2.93
Slx1bQ8BX32 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Slx1bQ8BX32 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
Slx1bQ8BX32 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC33.32■■■□□ 2.92
Slx1bQ8BX32 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Slx1bQ8BX32 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Slx1bQ8BX32 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Slx1bQ8BX32 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Slx1bQ8BX32 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Slx1bQ8BX32 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Slx1bQ8BX32 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC33.28■■■□□ 2.92
Slx1bQ8BX32 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Slx1bQ8BX32 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
Slx1bQ8BX32 Gm30346-201ENSMUST00000218641 1699 ntBASIC33.24■■■□□ 2.91
Slx1bQ8BX32 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Slx1bQ8BX32 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC33.22■■■□□ 2.91
Slx1bQ8BX32 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Slx1bQ8BX32 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Slx1bQ8BX32 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC33.2■■■□□ 2.91
Slx1bQ8BX32 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Slx1bQ8BX32 Gm11599-201ENSMUST00000118720 878 ntBASIC33.19■■■□□ 2.9
Slx1bQ8BX32 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
Slx1bQ8BX32 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Slx1bQ8BX32 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Slx1bQ8BX32 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Slx1bQ8BX32 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
Slx1bQ8BX32 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC33.13■■■□□ 2.89
Slx1bQ8BX32 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
Slx1bQ8BX32 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC33.13■■■□□ 2.89
Slx1bQ8BX32 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Slx1bQ8BX32 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Slx1bQ8BX32 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Slx1bQ8BX32 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC33.1■■■□□ 2.89
Slx1bQ8BX32 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Slx1bQ8BX32 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Slx1bQ8BX32 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC33.09■■■□□ 2.89
Slx1bQ8BX32 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Slx1bQ8BX32 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC33.08■■■□□ 2.89
Slx1bQ8BX32 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Slx1bQ8BX32 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Slx1bQ8BX32 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Slx1bQ8BX32 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Slx1bQ8BX32 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Slx1bQ8BX32 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Slx1bQ8BX32 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC33.03■■■□□ 2.88
Slx1bQ8BX32 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC33.03■■■□□ 2.88
Slx1bQ8BX32 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Slx1bQ8BX32 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Slx1bQ8BX32 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Slx1bQ8BX32 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Slx1bQ8BX32 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC33■■■□□ 2.87
Slx1bQ8BX32 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Slx1bQ8BX32 Mir6538-201ENSMUST00000183713 110 ntBASIC32.97■■■□□ 2.87
Slx1bQ8BX32 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC32.96■■■□□ 2.87
Slx1bQ8BX32 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
Slx1bQ8BX32 Gm11175-201ENSMUST00000116172 543 ntBASIC32.94■■■□□ 2.86
Slx1bQ8BX32 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
Slx1bQ8BX32 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Slx1bQ8BX32 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Slx1bQ8BX32 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Slx1bQ8BX32 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
Slx1bQ8BX32 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC32.89■■■□□ 2.86
Slx1bQ8BX32 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Slx1bQ8BX32 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC32.89■■■□□ 2.86
Slx1bQ8BX32 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
Slx1bQ8BX32 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Slx1bQ8BX32 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Slx1bQ8BX32 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC32.87■■■□□ 2.85
Slx1bQ8BX32 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Slx1bQ8BX32 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Slx1bQ8BX32 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Slx1bQ8BX32 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC32.83■■■□□ 2.85
Slx1bQ8BX32 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Slx1bQ8BX32 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Slx1bQ8BX32 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC32.82■■■□□ 2.85
Slx1bQ8BX32 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Slx1bQ8BX32 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Slx1bQ8BX32 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
Slx1bQ8BX32 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC32.79■■■□□ 2.84
Slx1bQ8BX32 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Slx1bQ8BX32 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Slx1bQ8BX32 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC32.79■■■□□ 2.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms