Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Hmbox1Q8BJA3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Hmbox1Q8BJA3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Hmbox1Q8BJA3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.99■■□□□ 1.43
Hmbox1Q8BJA3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.97■■□□□ 1.43
Hmbox1Q8BJA3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hmbox1Q8BJA3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hmbox1Q8BJA3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Hmbox1Q8BJA3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hmbox1Q8BJA3 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.93■■□□□ 1.42
Hmbox1Q8BJA3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hmbox1Q8BJA3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hmbox1Q8BJA3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.91■■□□□ 1.42
Hmbox1Q8BJA3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Hmbox1Q8BJA3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
Hmbox1Q8BJA3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Hmbox1Q8BJA3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.89■■□□□ 1.41
Hmbox1Q8BJA3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hmbox1Q8BJA3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.88■■□□□ 1.41
Hmbox1Q8BJA3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hmbox1Q8BJA3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hmbox1Q8BJA3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hmbox1Q8BJA3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hmbox1Q8BJA3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hmbox1Q8BJA3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hmbox1Q8BJA3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hmbox1Q8BJA3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hmbox1Q8BJA3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hmbox1Q8BJA3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
Hmbox1Q8BJA3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmbox1Q8BJA3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmbox1Q8BJA3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hmbox1Q8BJA3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmbox1Q8BJA3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hmbox1Q8BJA3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.78■■□□□ 1.4
Hmbox1Q8BJA3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hmbox1Q8BJA3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.76■■□□□ 1.39
Hmbox1Q8BJA3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hmbox1Q8BJA3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmbox1Q8BJA3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmbox1Q8BJA3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.75■■□□□ 1.39
Hmbox1Q8BJA3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmbox1Q8BJA3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hmbox1Q8BJA3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.74■■□□□ 1.39
Hmbox1Q8BJA3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hmbox1Q8BJA3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hmbox1Q8BJA3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Hmbox1Q8BJA3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Hmbox1Q8BJA3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hmbox1Q8BJA3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hmbox1Q8BJA3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hmbox1Q8BJA3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hmbox1Q8BJA3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
Hmbox1Q8BJA3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hmbox1Q8BJA3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Hmbox1Q8BJA3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.7■■□□□ 1.38
Hmbox1Q8BJA3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Hmbox1Q8BJA3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.68■■□□□ 1.38
Hmbox1Q8BJA3 Amer2-203ENSMUST00000225247 2662 ntBASIC23.67■■□□□ 1.38
Hmbox1Q8BJA3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hmbox1Q8BJA3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hmbox1Q8BJA3 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.67■■□□□ 1.38
Hmbox1Q8BJA3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hmbox1Q8BJA3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Hmbox1Q8BJA3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Hmbox1Q8BJA3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Hmbox1Q8BJA3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Hmbox1Q8BJA3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hmbox1Q8BJA3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Hmbox1Q8BJA3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Hmbox1Q8BJA3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Hmbox1Q8BJA3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hmbox1Q8BJA3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Hmbox1Q8BJA3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Hmbox1Q8BJA3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
Hmbox1Q8BJA3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
Hmbox1Q8BJA3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hmbox1Q8BJA3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hmbox1Q8BJA3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hmbox1Q8BJA3 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.62■■□□□ 1.37
Hmbox1Q8BJA3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hmbox1Q8BJA3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Hmbox1Q8BJA3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hmbox1Q8BJA3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Hmbox1Q8BJA3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hmbox1Q8BJA3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hmbox1Q8BJA3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Hmbox1Q8BJA3 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.59■■□□□ 1.37
Hmbox1Q8BJA3 Gm7432-201ENSMUST00000210343 879 ntBASIC23.59■■□□□ 1.37
Hmbox1Q8BJA3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hmbox1Q8BJA3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Hmbox1Q8BJA3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hmbox1Q8BJA3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Hmbox1Q8BJA3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Hmbox1Q8BJA3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hmbox1Q8BJA3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Hmbox1Q8BJA3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Hmbox1Q8BJA3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hmbox1Q8BJA3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Hmbox1Q8BJA3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms