Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Trnp1Q80ZI1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Trnp1Q80ZI1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.16■■■□□ 2.26
Trnp1Q80ZI1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Trnp1Q80ZI1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.16■■■□□ 2.26
Trnp1Q80ZI1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
Trnp1Q80ZI1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Trnp1Q80ZI1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Trnp1Q80ZI1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.13■■■□□ 2.25
Trnp1Q80ZI1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Trnp1Q80ZI1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
Trnp1Q80ZI1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
Trnp1Q80ZI1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Trnp1Q80ZI1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Trnp1Q80ZI1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Trnp1Q80ZI1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Trnp1Q80ZI1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.1■■■□□ 2.25
Trnp1Q80ZI1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Trnp1Q80ZI1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
Trnp1Q80ZI1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Trnp1Q80ZI1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Trnp1Q80ZI1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Trnp1Q80ZI1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Trnp1Q80ZI1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
Trnp1Q80ZI1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Trnp1Q80ZI1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Trnp1Q80ZI1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trnp1Q80ZI1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trnp1Q80ZI1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trnp1Q80ZI1 Gm11599-201ENSMUST00000118720 878 ntBASIC29.01■■■□□ 2.23
Trnp1Q80ZI1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Trnp1Q80ZI1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.99■■■□□ 2.23
Trnp1Q80ZI1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Trnp1Q80ZI1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Trnp1Q80ZI1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.98■■■□□ 2.23
Trnp1Q80ZI1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trnp1Q80ZI1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Trnp1Q80ZI1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.95■■■□□ 2.22
Trnp1Q80ZI1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Trnp1Q80ZI1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Trnp1Q80ZI1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Trnp1Q80ZI1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Trnp1Q80ZI1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Trnp1Q80ZI1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Trnp1Q80ZI1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.92■■■□□ 2.22
Trnp1Q80ZI1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Trnp1Q80ZI1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Trnp1Q80ZI1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.9■■■□□ 2.22
Trnp1Q80ZI1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.9■■■□□ 2.22
Trnp1Q80ZI1 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.89■■■□□ 2.21
Trnp1Q80ZI1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Trnp1Q80ZI1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.87■■■□□ 2.21
Trnp1Q80ZI1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trnp1Q80ZI1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trnp1Q80ZI1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trnp1Q80ZI1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.84■■■□□ 2.21
Trnp1Q80ZI1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Trnp1Q80ZI1 Mir6538-201ENSMUST00000183713 110 ntBASIC28.82■■■□□ 2.2
Trnp1Q80ZI1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Trnp1Q80ZI1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Trnp1Q80ZI1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Trnp1Q80ZI1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Trnp1Q80ZI1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Trnp1Q80ZI1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Trnp1Q80ZI1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.78■■■□□ 2.2
Trnp1Q80ZI1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Trnp1Q80ZI1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Trnp1Q80ZI1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Trnp1Q80ZI1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Trnp1Q80ZI1 Gm11175-201ENSMUST00000116172 543 ntBASIC28.76■■■□□ 2.19
Trnp1Q80ZI1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Trnp1Q80ZI1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Trnp1Q80ZI1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.75■■■□□ 2.19
Trnp1Q80ZI1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Trnp1Q80ZI1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Trnp1Q80ZI1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Trnp1Q80ZI1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Trnp1Q80ZI1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Trnp1Q80ZI1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.71■■■□□ 2.19
Trnp1Q80ZI1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Trnp1Q80ZI1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Trnp1Q80ZI1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Trnp1Q80ZI1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
Trnp1Q80ZI1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Trnp1Q80ZI1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trnp1Q80ZI1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.68■■■□□ 2.18
Trnp1Q80ZI1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Trnp1Q80ZI1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.67■■■□□ 2.18
Trnp1Q80ZI1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
Trnp1Q80ZI1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
Trnp1Q80ZI1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Trnp1Q80ZI1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Trnp1Q80ZI1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.64■■■□□ 2.18
Trnp1Q80ZI1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.64■■■□□ 2.18
Trnp1Q80ZI1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Trnp1Q80ZI1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.63■■■□□ 2.17
Trnp1Q80ZI1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Trnp1Q80ZI1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.62■■■□□ 2.17
Trnp1Q80ZI1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Trnp1Q80ZI1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms