Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC36,92■■■■□ 3,5
ShprhQ7TPQ3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC36,92■■■■□ 3,5
ShprhQ7TPQ3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC36,91■■■■□ 3,5
ShprhQ7TPQ3 Gm2415-204ENSMUST00000190235 2004 ntBASIC36,89■■■■□ 3,5
ShprhQ7TPQ3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC36,89■■■■□ 3,5
ShprhQ7TPQ3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC36,89■■■■□ 3,5
ShprhQ7TPQ3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC36,88■■■■□ 3,49
ShprhQ7TPQ3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC36,88■■■■□ 3,49
ShprhQ7TPQ3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC36,87■■■■□ 3,49
ShprhQ7TPQ3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC36,86■■■■□ 3,49
ShprhQ7TPQ3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC36,86■■■■□ 3,49
ShprhQ7TPQ3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC36,85■■■■□ 3,49
ShprhQ7TPQ3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC36,84■■■■□ 3,49
ShprhQ7TPQ3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC36,82■■■■□ 3,48
ShprhQ7TPQ3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC36,82■■■■□ 3,48
ShprhQ7TPQ3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC36,82■■■■□ 3,48
ShprhQ7TPQ3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC36,81■■■■□ 3,48
ShprhQ7TPQ3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC36,81■■■■□ 3,48
ShprhQ7TPQ3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC36,8■■■■□ 3,48
ShprhQ7TPQ3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC36,79■■■■□ 3,48
ShprhQ7TPQ3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC36,77■■■■□ 3,48
ShprhQ7TPQ3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC36,76■■■■□ 3,47
ShprhQ7TPQ3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC36,75■■■■□ 3,47
ShprhQ7TPQ3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC36,74■■■■□ 3,47
ShprhQ7TPQ3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC36,74■■■■□ 3,47
ShprhQ7TPQ3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC36,73■■■■□ 3,47
ShprhQ7TPQ3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC36,72■■■■□ 3,47
ShprhQ7TPQ3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC36,72■■■■□ 3,47
ShprhQ7TPQ3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC36,71■■■■□ 3,47
ShprhQ7TPQ3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC36,71■■■■□ 3,47
ShprhQ7TPQ3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC36,71■■■■□ 3,47
ShprhQ7TPQ3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC36,7■■■■□ 3,47
ShprhQ7TPQ3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC36,69■■■■□ 3,46
ShprhQ7TPQ3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC36,66■■■■□ 3,46
ShprhQ7TPQ3 Nkain2-201ENSMUST00000092602 558 ntBASIC36,65■■■■□ 3,46
ShprhQ7TPQ3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC36,64■■■■□ 3,46
ShprhQ7TPQ3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC36,62■■■■□ 3,45
ShprhQ7TPQ3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC36,62■■■■□ 3,45
ShprhQ7TPQ3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC36,62■■■■□ 3,45
ShprhQ7TPQ3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC36,61■■■■□ 3,45
ShprhQ7TPQ3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC36,59■■■■□ 3,45
ShprhQ7TPQ3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC36,57■■■■□ 3,44
ShprhQ7TPQ3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC36,56■■■■□ 3,44
ShprhQ7TPQ3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC36,55■■■■□ 3,44
ShprhQ7TPQ3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC36,54■■■■□ 3,44
ShprhQ7TPQ3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC36,54■■■■□ 3,44
ShprhQ7TPQ3 Gm6658-202ENSMUST00000209493 1885 ntBASIC36,52■■■■□ 3,44
ShprhQ7TPQ3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC36,5■■■■□ 3,43
ShprhQ7TPQ3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC36,5■■■■□ 3,43
ShprhQ7TPQ3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC36,49■■■■□ 3,43
ShprhQ7TPQ3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC36,49■■■■□ 3,43
ShprhQ7TPQ3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC36,49■■■■□ 3,43
ShprhQ7TPQ3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC36,49■■■■□ 3,43
ShprhQ7TPQ3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC36,48■■■■□ 3,43
ShprhQ7TPQ3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC36,47■■■■□ 3,43
ShprhQ7TPQ3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC36,47■■■■□ 3,43
ShprhQ7TPQ3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC36,46■■■■□ 3,43
ShprhQ7TPQ3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC36,46■■■■□ 3,43
ShprhQ7TPQ3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC36,45■■■■□ 3,43
ShprhQ7TPQ3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC36,44■■■■□ 3,42
ShprhQ7TPQ3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC36,42■■■■□ 3,42
ShprhQ7TPQ3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC36,42■■■■□ 3,42
ShprhQ7TPQ3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC36,42■■■■□ 3,42
ShprhQ7TPQ3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC36,39■■■■□ 3,42
ShprhQ7TPQ3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC36,39■■■■□ 3,42
ShprhQ7TPQ3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC36,38■■■■□ 3,41
ShprhQ7TPQ3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC36,38■■■■□ 3,41
ShprhQ7TPQ3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC36,38■■■■□ 3,41
ShprhQ7TPQ3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC36,37■■■■□ 3,41
ShprhQ7TPQ3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC36,37■■■■□ 3,41
ShprhQ7TPQ3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC36,35■■■■□ 3,41
ShprhQ7TPQ3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC36,34■■■■□ 3,41
ShprhQ7TPQ3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,41
ShprhQ7TPQ3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,41
ShprhQ7TPQ3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,41
ShprhQ7TPQ3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC36,3■■■■□ 3,4
ShprhQ7TPQ3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC36,29■■■■□ 3,4
ShprhQ7TPQ3 Gm7432-201ENSMUST00000210343 879 ntBASIC36,28■■■■□ 3,4
ShprhQ7TPQ3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC36,28■■■■□ 3,4
ShprhQ7TPQ3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC36,26■■■■□ 3,4
ShprhQ7TPQ3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC36,26■■■■□ 3,4
ShprhQ7TPQ3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC36,25■■■■□ 3,39
ShprhQ7TPQ3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC36,24■■■■□ 3,39
ShprhQ7TPQ3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC36,24■■■■□ 3,39
ShprhQ7TPQ3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC36,24■■■■□ 3,39
ShprhQ7TPQ3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC36,22■■■■□ 3,39
ShprhQ7TPQ3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC36,21■■■■□ 3,39
ShprhQ7TPQ3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC36,2■■■■□ 3,39
ShprhQ7TPQ3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC36,19■■■■□ 3,38
ShprhQ7TPQ3 Gm11599-201ENSMUST00000118720 878 ntBASIC36,16■■■■□ 3,38
ShprhQ7TPQ3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC36,16■■■■□ 3,38
ShprhQ7TPQ3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC36,15■■■■□ 3,38
ShprhQ7TPQ3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC36,14■■■■□ 3,38
ShprhQ7TPQ3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC36,13■■■■□ 3,37
ShprhQ7TPQ3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC36,13■■■■□ 3,37
ShprhQ7TPQ3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC36,13■■■■□ 3,37
ShprhQ7TPQ3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC36,13■■■■□ 3,37
ShprhQ7TPQ3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC36,11■■■■□ 3,37
ShprhQ7TPQ3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC36,1■■■■□ 3,37
ShprhQ7TPQ3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC36,1■■■■□ 3,37
Retrieved 100 of 76,532 protein–RNA pairs in 10,6 ms