Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.47■■□□□ 1.83
PrnpP04925 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PrnpP04925 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.46■■□□□ 1.83
PrnpP04925 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PrnpP04925 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.45■■□□□ 1.82
PrnpP04925 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
PrnpP04925 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.43■■□□□ 1.82
PrnpP04925 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PrnpP04925 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PrnpP04925 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
PrnpP04925 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PrnpP04925 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PrnpP04925 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PrnpP04925 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PrnpP04925 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PrnpP04925 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PrnpP04925 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PrnpP04925 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PrnpP04925 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PrnpP04925 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
PrnpP04925 Nkain2-201ENSMUST00000092602 558 ntBASIC26.36■■□□□ 1.81
PrnpP04925 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PrnpP04925 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PrnpP04925 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PrnpP04925 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PrnpP04925 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PrnpP04925 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PrnpP04925 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.33■■□□□ 1.81
PrnpP04925 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PrnpP04925 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PrnpP04925 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PrnpP04925 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PrnpP04925 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.28■■□□□ 1.8
PrnpP04925 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PrnpP04925 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PrnpP04925 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.27■■□□□ 1.8
PrnpP04925 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PrnpP04925 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PrnpP04925 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PrnpP04925 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
PrnpP04925 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PrnpP04925 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.23■■□□□ 1.79
PrnpP04925 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
PrnpP04925 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PrnpP04925 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PrnpP04925 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PrnpP04925 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PrnpP04925 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PrnpP04925 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PrnpP04925 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PrnpP04925 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.18■■□□□ 1.78
PrnpP04925 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PrnpP04925 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PrnpP04925 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PrnpP04925 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.17■■□□□ 1.78
PrnpP04925 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PrnpP04925 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PrnpP04925 Gm7432-201ENSMUST00000210343 879 ntBASIC26.14■■□□□ 1.78
PrnpP04925 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.14■■□□□ 1.78
PrnpP04925 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PrnpP04925 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
PrnpP04925 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.12■■□□□ 1.77
PrnpP04925 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PrnpP04925 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.12■■□□□ 1.77
PrnpP04925 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PrnpP04925 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PrnpP04925 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PrnpP04925 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PrnpP04925 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
PrnpP04925 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PrnpP04925 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PrnpP04925 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PrnpP04925 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PrnpP04925 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PrnpP04925 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.04■■□□□ 1.76
PrnpP04925 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PrnpP04925 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.03■■□□□ 1.76
PrnpP04925 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PrnpP04925 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PrnpP04925 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PrnpP04925 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
PrnpP04925 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PrnpP04925 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PrnpP04925 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PrnpP04925 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PrnpP04925 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PrnpP04925 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PrnpP04925 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PrnpP04925 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PrnpP04925 Gm11599-201ENSMUST00000118720 878 ntBASIC25.94■■□□□ 1.74
PrnpP04925 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
PrnpP04925 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
PrnpP04925 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PrnpP04925 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
PrnpP04925 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.91■■□□□ 1.74
PrnpP04925 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.9■■□□□ 1.74
PrnpP04925 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.89■■□□□ 1.74
PrnpP04925 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
PrnpP04925 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PrnpP04925 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms