Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.44■■□□□ 1.82
Psmc3O88685 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Psmc3O88685 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.43■■□□□ 1.82
Psmc3O88685 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Psmc3O88685 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Psmc3O88685 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.41■■□□□ 1.82
Psmc3O88685 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.41■■□□□ 1.82
Psmc3O88685 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Psmc3O88685 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.39■■□□□ 1.82
Psmc3O88685 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Psmc3O88685 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Psmc3O88685 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Psmc3O88685 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Psmc3O88685 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Psmc3O88685 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.38■■□□□ 1.81
Psmc3O88685 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Psmc3O88685 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Psmc3O88685 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Psmc3O88685 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Psmc3O88685 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.34■■□□□ 1.81
Psmc3O88685 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.33■■□□□ 1.81
Psmc3O88685 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Psmc3O88685 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Psmc3O88685 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Psmc3O88685 Nkain2-201ENSMUST00000092602 558 ntBASIC26.31■■□□□ 1.8
Psmc3O88685 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Psmc3O88685 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Psmc3O88685 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Psmc3O88685 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Psmc3O88685 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.28■■□□□ 1.8
Psmc3O88685 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Psmc3O88685 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Psmc3O88685 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Psmc3O88685 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.27■■□□□ 1.8
Psmc3O88685 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.26■■□□□ 1.79
Psmc3O88685 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Psmc3O88685 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Psmc3O88685 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Psmc3O88685 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Psmc3O88685 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Psmc3O88685 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Psmc3O88685 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Psmc3O88685 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.24■■□□□ 1.79
Psmc3O88685 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.24■■□□□ 1.79
Psmc3O88685 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Psmc3O88685 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Psmc3O88685 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Psmc3O88685 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Psmc3O88685 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Psmc3O88685 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Psmc3O88685 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Psmc3O88685 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.19■■□□□ 1.78
Psmc3O88685 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Psmc3O88685 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Psmc3O88685 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.17■■□□□ 1.78
Psmc3O88685 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.16■■□□□ 1.78
Psmc3O88685 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Psmc3O88685 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Psmc3O88685 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Psmc3O88685 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.78
Psmc3O88685 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
Psmc3O88685 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Psmc3O88685 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Psmc3O88685 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Psmc3O88685 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Psmc3O88685 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Psmc3O88685 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Psmc3O88685 Gm7432-201ENSMUST00000210343 879 ntBASIC26.09■■□□□ 1.77
Psmc3O88685 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Psmc3O88685 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.07■■□□□ 1.76
Psmc3O88685 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Psmc3O88685 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Psmc3O88685 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Psmc3O88685 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Psmc3O88685 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Psmc3O88685 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.04■■□□□ 1.76
Psmc3O88685 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Psmc3O88685 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Psmc3O88685 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Psmc3O88685 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26■■□□□ 1.75
Psmc3O88685 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Psmc3O88685 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.99■■□□□ 1.75
Psmc3O88685 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Psmc3O88685 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Psmc3O88685 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Psmc3O88685 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Psmc3O88685 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Psmc3O88685 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Psmc3O88685 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.95■■□□□ 1.74
Psmc3O88685 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.95■■□□□ 1.74
Psmc3O88685 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Psmc3O88685 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Psmc3O88685 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Psmc3O88685 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Psmc3O88685 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Psmc3O88685 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
Psmc3O88685 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Psmc3O88685 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Psmc3O88685 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Psmc3O88685 Gm11599-201ENSMUST00000118720 878 ntBASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms