Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Ubr1O70481 Gm6658-202ENSMUST00000209493 1885 ntBASIC33.7■■■□□ 2.99
Ubr1O70481 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC33.69■■■□□ 2.98
Ubr1O70481 Gm5987-201ENSMUST00000196433 1151 ntBASIC33.69■■■□□ 2.98
Ubr1O70481 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Ubr1O70481 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Ubr1O70481 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC33.68■■■□□ 2.98
Ubr1O70481 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC33.67■■■□□ 2.98
Ubr1O70481 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Ubr1O70481 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Ubr1O70481 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
Ubr1O70481 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Ubr1O70481 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Ubr1O70481 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Ubr1O70481 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Ubr1O70481 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
Ubr1O70481 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC33.61■■■□□ 2.97
Ubr1O70481 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC33.6■■■□□ 2.97
Ubr1O70481 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Ubr1O70481 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC33.57■■■□□ 2.96
Ubr1O70481 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Ubr1O70481 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
Ubr1O70481 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Ubr1O70481 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Ubr1O70481 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC33.55■■■□□ 2.96
Ubr1O70481 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Ubr1O70481 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Ubr1O70481 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Ubr1O70481 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Ubr1O70481 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Ubr1O70481 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Ubr1O70481 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ubr1O70481 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC33.49■■■□□ 2.95
Ubr1O70481 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Ubr1O70481 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Ubr1O70481 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
Ubr1O70481 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Ubr1O70481 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Ubr1O70481 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC33.42■■■□□ 2.94
Ubr1O70481 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Ubr1O70481 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC33.4■■■□□ 2.94
Ubr1O70481 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Ubr1O70481 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC33.39■■■□□ 2.94
Ubr1O70481 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Ubr1O70481 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
Ubr1O70481 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC33.37■■■□□ 2.93
Ubr1O70481 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Ubr1O70481 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Ubr1O70481 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Ubr1O70481 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC33.34■■■□□ 2.93
Ubr1O70481 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Ubr1O70481 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Ubr1O70481 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC33.33■■■□□ 2.93
Ubr1O70481 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC33.32■■■□□ 2.92
Ubr1O70481 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Ubr1O70481 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Ubr1O70481 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Ubr1O70481 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.3■■■□□ 2.92
Ubr1O70481 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC33.28■■■□□ 2.92
Ubr1O70481 Nkain2-201ENSMUST00000092602 558 ntBASIC33.27■■■□□ 2.92
Ubr1O70481 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
Ubr1O70481 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Ubr1O70481 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC33.24■■■□□ 2.91
Ubr1O70481 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ubr1O70481 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC33.24■■■□□ 2.91
Ubr1O70481 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC33.23■■■□□ 2.91
Ubr1O70481 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Ubr1O70481 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Ubr1O70481 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Ubr1O70481 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Ubr1O70481 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Ubr1O70481 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Ubr1O70481 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ubr1O70481 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
Ubr1O70481 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ubr1O70481 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ubr1O70481 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC33.14■■■□□ 2.9
Ubr1O70481 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33.13■■■□□ 2.89
Ubr1O70481 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC33.11■■■□□ 2.89
Ubr1O70481 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC33.1■■■□□ 2.89
Ubr1O70481 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Ubr1O70481 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ubr1O70481 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
Ubr1O70481 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC33.08■■■□□ 2.89
Ubr1O70481 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Ubr1O70481 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC33.06■■■□□ 2.88
Ubr1O70481 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
Ubr1O70481 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC33.04■■■□□ 2.88
Ubr1O70481 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ubr1O70481 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC33.03■■■□□ 2.88
Ubr1O70481 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Ubr1O70481 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Ubr1O70481 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ubr1O70481 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC33.03■■■□□ 2.88
Ubr1O70481 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Ubr1O70481 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC33.02■■■□□ 2.88
Ubr1O70481 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ubr1O70481 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Ubr1O70481 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Ubr1O70481 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC32.93■■■□□ 2.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms