Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Casp6O08738 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Casp6O08738 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Casp6O08738 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Casp6O08738 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.55■■□□□ 1.04
Casp6O08738 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Casp6O08738 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Casp6O08738 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Casp6O08738 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.51■■□□□ 1.03
Casp6O08738 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Casp6O08738 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Casp6O08738 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Casp6O08738 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Casp6O08738 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.5■■□□□ 1.03
Casp6O08738 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Casp6O08738 Nkain2-201ENSMUST00000092602 558 ntBASIC21.49■■□□□ 1.03
Casp6O08738 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Casp6O08738 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.46■■□□□ 1.03
Casp6O08738 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Casp6O08738 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Casp6O08738 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Casp6O08738 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Casp6O08738 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Casp6O08738 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Casp6O08738 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Casp6O08738 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Casp6O08738 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.42■■□□□ 1.02
Casp6O08738 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Casp6O08738 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Casp6O08738 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Casp6O08738 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Casp6O08738 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Casp6O08738 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Casp6O08738 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.39■■□□□ 1.01
Casp6O08738 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Casp6O08738 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Casp6O08738 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Casp6O08738 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Casp6O08738 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Casp6O08738 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.38■■□□□ 1.01
Casp6O08738 Gm7432-201ENSMUST00000210343 879 ntBASIC21.38■■□□□ 1.01
Casp6O08738 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Casp6O08738 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Casp6O08738 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Casp6O08738 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Casp6O08738 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Casp6O08738 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Casp6O08738 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Casp6O08738 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Casp6O08738 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Casp6O08738 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.34■■□□□ 1.01
Casp6O08738 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Casp6O08738 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Casp6O08738 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Casp6O08738 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.33■■□□□ 1
Casp6O08738 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Casp6O08738 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Casp6O08738 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.32■■□□□ 1
Casp6O08738 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Casp6O08738 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.32■■□□□ 1
Casp6O08738 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.31■■□□□ 1
Casp6O08738 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Casp6O08738 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.29■■□□□ 1
Casp6O08738 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.29■■□□□ 1
Casp6O08738 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.28■■□□□ 1
Casp6O08738 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Casp6O08738 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Casp6O08738 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Casp6O08738 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casp6O08738 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casp6O08738 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Casp6O08738 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casp6O08738 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Casp6O08738 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Casp6O08738 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.23■□□□□ 0.99
Casp6O08738 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casp6O08738 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casp6O08738 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casp6O08738 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.22■□□□□ 0.99
Casp6O08738 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Casp6O08738 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Casp6O08738 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casp6O08738 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casp6O08738 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.2■□□□□ 0.98
Casp6O08738 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Casp6O08738 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casp6O08738 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casp6O08738 Gm11599-201ENSMUST00000118720 878 ntBASIC21.19■□□□□ 0.98
Casp6O08738 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Casp6O08738 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casp6O08738 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Casp6O08738 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.17■□□□□ 0.98
Casp6O08738 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Casp6O08738 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Casp6O08738 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Casp6O08738 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casp6O08738 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Casp6O08738 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.12■□□□□ 0.97
Casp6O08738 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Casp6O08738 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms