Protein–RNA interactions for Protein: A0A140T8P2

Igkv6-20, Immunoglobulin kappa variable 6-20 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-20A0A140T8P2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Igkv6-20A0A140T8P2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Igkv6-20A0A140T8P2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Igkv6-20A0A140T8P2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Igkv6-20A0A140T8P2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Igkv6-20A0A140T8P2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
Igkv6-20A0A140T8P2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Igkv6-20A0A140T8P2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Igkv6-20A0A140T8P2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.4■■□□□ 1.5
Igkv6-20A0A140T8P2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Igkv6-20A0A140T8P2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Igkv6-20A0A140T8P2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv6-20A0A140T8P2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv6-20A0A140T8P2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv6-20A0A140T8P2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv6-20A0A140T8P2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Igkv6-20A0A140T8P2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.37■■□□□ 1.49
Igkv6-20A0A140T8P2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv6-20A0A140T8P2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv6-20A0A140T8P2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv6-20A0A140T8P2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv6-20A0A140T8P2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv6-20A0A140T8P2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv6-20A0A140T8P2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Igkv6-20A0A140T8P2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv6-20A0A140T8P2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Igkv6-20A0A140T8P2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Igkv6-20A0A140T8P2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Igkv6-20A0A140T8P2 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.3■■□□□ 1.48
Igkv6-20A0A140T8P2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Igkv6-20A0A140T8P2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.3■■□□□ 1.48
Igkv6-20A0A140T8P2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Igkv6-20A0A140T8P2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Igkv6-20A0A140T8P2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.26■■□□□ 1.47
Igkv6-20A0A140T8P2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Igkv6-20A0A140T8P2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Igkv6-20A0A140T8P2 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.25■■□□□ 1.47
Igkv6-20A0A140T8P2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.25■■□□□ 1.47
Igkv6-20A0A140T8P2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Igkv6-20A0A140T8P2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Igkv6-20A0A140T8P2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Igkv6-20A0A140T8P2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Igkv6-20A0A140T8P2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Igkv6-20A0A140T8P2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Igkv6-20A0A140T8P2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Igkv6-20A0A140T8P2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Igkv6-20A0A140T8P2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Igkv6-20A0A140T8P2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Igkv6-20A0A140T8P2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.18■■□□□ 1.46
Igkv6-20A0A140T8P2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Igkv6-20A0A140T8P2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv6-20A0A140T8P2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Igkv6-20A0A140T8P2 Gm8503-201ENSMUST00000118131 455 ntBASIC24.16■■□□□ 1.46
Igkv6-20A0A140T8P2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.16■■□□□ 1.46
Igkv6-20A0A140T8P2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Igkv6-20A0A140T8P2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Igkv6-20A0A140T8P2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Igkv6-20A0A140T8P2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Igkv6-20A0A140T8P2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Igkv6-20A0A140T8P2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Igkv6-20A0A140T8P2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Igkv6-20A0A140T8P2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Igkv6-20A0A140T8P2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
Igkv6-20A0A140T8P2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Igkv6-20A0A140T8P2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.1■■□□□ 1.45
Igkv6-20A0A140T8P2 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.1■■□□□ 1.45
Igkv6-20A0A140T8P2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Igkv6-20A0A140T8P2 Gm6821-201ENSMUST00000107540 542 ntBASIC24.09■■□□□ 1.45
Igkv6-20A0A140T8P2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Igkv6-20A0A140T8P2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Igkv6-20A0A140T8P2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Igkv6-20A0A140T8P2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Igkv6-20A0A140T8P2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Igkv6-20A0A140T8P2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Igkv6-20A0A140T8P2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Igkv6-20A0A140T8P2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Igkv6-20A0A140T8P2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Igkv6-20A0A140T8P2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Igkv6-20A0A140T8P2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.03■■□□□ 1.44
Igkv6-20A0A140T8P2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Igkv6-20A0A140T8P2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Igkv6-20A0A140T8P2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.02■■□□□ 1.44
Igkv6-20A0A140T8P2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Igkv6-20A0A140T8P2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
Igkv6-20A0A140T8P2 Nkain2-201ENSMUST00000092602 558 ntBASIC24■■□□□ 1.43
Igkv6-20A0A140T8P2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Igkv6-20A0A140T8P2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Igkv6-20A0A140T8P2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Igkv6-20A0A140T8P2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.99■■□□□ 1.43
Igkv6-20A0A140T8P2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Igkv6-20A0A140T8P2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Igkv6-20A0A140T8P2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Igkv6-20A0A140T8P2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Igkv6-20A0A140T8P2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Igkv6-20A0A140T8P2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.96■■□□□ 1.43
Igkv6-20A0A140T8P2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Igkv6-20A0A140T8P2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Igkv6-20A0A140T8P2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Igkv6-20A0A140T8P2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Igkv6-20A0A140T8P2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms