Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DNMT3AQ9Y6K1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DNMT3AQ9Y6K1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 MFSD11-216ENST00000590393 1141 ntBASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 AC080038.1-201ENST00000611274 1154 ntBASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
DNMT3AQ9Y6K1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DNMT3AQ9Y6K1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 AC243732.1-201ENST00000612648 864 ntBASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DNMT3AQ9Y6K1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 DUX4L16-201ENST00000555130 1264 ntBASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 AC010536.3-201ENST00000620306 533 ntBASIC20.58■□□□□ 0.89
DNMT3AQ9Y6K1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DNMT3AQ9Y6K1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNMT3AQ9Y6K1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNMT3AQ9Y6K1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DNMT3AQ9Y6K1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.58■□□□□ 0.88
DNMT3AQ9Y6K1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
DNMT3AQ9Y6K1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT3AQ9Y6K1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT3AQ9Y6K1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT3AQ9Y6K1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DNMT3AQ9Y6K1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms