Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
GPC6Q9Y625 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
GPC6Q9Y625 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GPC6Q9Y625 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GPC6Q9Y625 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC6Q9Y625 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC6Q9Y625 MIR638-201ENST00000385237 100 ntBASIC19.8■□□□□ 0.76
GPC6Q9Y625 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.8■□□□□ 0.76
GPC6Q9Y625 AC099791.1-201ENST00000416440 715 ntBASIC19.8■□□□□ 0.76
GPC6Q9Y625 AF213884.3-201ENST00000563833 479 ntBASIC19.8■□□□□ 0.76
GPC6Q9Y625 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GPC6Q9Y625 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.8■□□□□ 0.76
GPC6Q9Y625 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GPC6Q9Y625 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC6Q9Y625 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GPC6Q9Y625 RASA4CP-201ENST00000424092 1398 ntBASIC19.8■□□□□ 0.76
GPC6Q9Y625 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GPC6Q9Y625 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC6Q9Y625 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC6Q9Y625 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC6Q9Y625 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.79■□□□□ 0.76
GPC6Q9Y625 SUDS3P1-201ENST00000505831 966 ntBASIC19.79■□□□□ 0.76
GPC6Q9Y625 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GPC6Q9Y625 AC005837.3-201ENST00000612163 286 ntBASIC19.79■□□□□ 0.76
GPC6Q9Y625 AL136967.2-201ENST00000623968 743 ntBASIC19.79■□□□□ 0.76
GPC6Q9Y625 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC6Q9Y625 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GPC6Q9Y625 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GPC6Q9Y625 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.79■□□□□ 0.76
GPC6Q9Y625 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GPC6Q9Y625 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.79■□□□□ 0.76
GPC6Q9Y625 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GPC6Q9Y625 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.78■□□□□ 0.76
GPC6Q9Y625 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 AP004607.7-201ENST00000527152 1677 ntBASIC19.78■□□□□ 0.76
GPC6Q9Y625 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.78■□□□□ 0.76
GPC6Q9Y625 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.78■□□□□ 0.76
GPC6Q9Y625 AC142381.2-201ENST00000566120 298 ntBASIC19.78■□□□□ 0.76
GPC6Q9Y625 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.78■□□□□ 0.76
GPC6Q9Y625 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC6Q9Y625 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
GPC6Q9Y625 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
GPC6Q9Y625 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GPC6Q9Y625 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC6Q9Y625 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.77■□□□□ 0.76
GPC6Q9Y625 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.77■□□□□ 0.76
GPC6Q9Y625 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC6Q9Y625 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
GPC6Q9Y625 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.77■□□□□ 0.76
GPC6Q9Y625 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC6Q9Y625 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC6Q9Y625 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC6Q9Y625 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC6Q9Y625 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC6Q9Y625 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
GPC6Q9Y625 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GPC6Q9Y625 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
GPC6Q9Y625 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC6Q9Y625 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC6Q9Y625 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC6Q9Y625 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GPC6Q9Y625 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GPC6Q9Y625 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.76■□□□□ 0.75
GPC6Q9Y625 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GPC6Q9Y625 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GPC6Q9Y625 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC6Q9Y625 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC6Q9Y625 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
GPC6Q9Y625 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC6Q9Y625 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC6Q9Y625 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC6Q9Y625 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC6Q9Y625 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
GPC6Q9Y625 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.75■□□□□ 0.75
GPC6Q9Y625 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.75■□□□□ 0.75
GPC6Q9Y625 IGHV3-19-201ENST00000521488 291 ntBASIC19.75■□□□□ 0.75
GPC6Q9Y625 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC6Q9Y625 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC6Q9Y625 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC6Q9Y625 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC6Q9Y625 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC6Q9Y625 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC6Q9Y625 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.75■□□□□ 0.75
GPC6Q9Y625 AC003102.1-202ENST00000563394 1796 ntBASIC19.75■□□□□ 0.75
GPC6Q9Y625 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC6Q9Y625 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
GPC6Q9Y625 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms