Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 AC008403.3-201ENST00000598924 454 ntBASIC23.27■■□□□ 1.32
SCN10AQ9Y5Y9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 AC100791.3-201ENST00000617619 330 ntBASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 AC127496.7-201ENST00000625110 1798 ntBASIC23.26■■□□□ 1.31
SCN10AQ9Y5Y9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 AC026471.6-201ENST00000622954 1905 ntBASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 AC060766.5-201ENST00000590539 871 ntBASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.25■■□□□ 1.31
SCN10AQ9Y5Y9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 C11orf96-202ENST00000528572 1834 ntBASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 AC128676.1-201ENST00000454392 318 ntBASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SCN10AQ9Y5Y9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SCN10AQ9Y5Y9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
SCN10AQ9Y5Y9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.23■■□□□ 1.31
SCN10AQ9Y5Y9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.23■■□□□ 1.31
SCN10AQ9Y5Y9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SCN10AQ9Y5Y9 AC245052.3-201ENST00000450182 901 ntBASIC23.23■■□□□ 1.31
SCN10AQ9Y5Y9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SCN10AQ9Y5Y9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 AL158047.1-201ENST00000445918 881 ntBASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
SCN10AQ9Y5Y9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCN10AQ9Y5Y9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SCN10AQ9Y5Y9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 LSM12P1-201ENST00000411836 588 ntBASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 AC007322.3-201ENST00000426526 701 ntBASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 AC092053.2-201ENST00000640557 1818 ntBASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN10AQ9Y5Y9 AC080038.3-201ENST00000623346 1952 ntBASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.19■■□□□ 1.3
SCN10AQ9Y5Y9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms