Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 SLC7A5P2-201ENST00000553010 536 ntBASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 AC008175.2-201ENST00000612840 297 ntBASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 AC016769.1-201ENST00000409132 1010 ntBASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 AC092437.1-201ENST00000624794 1048 ntBASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGC4Q9Y5F7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 Z98882.1-201ENST00000622160 2253 ntBASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 UBE2DNL-204ENST00000602536 740 ntBASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC4Q9Y5F7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC4Q9Y5F7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 POU5F1P4-201ENST00000413175 1085 ntBASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 AC006015.1-201ENST00000429970 570 ntBASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDHGC4Q9Y5F7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 KRT18P20-201ENST00000548986 1279 ntBASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC4Q9Y5F7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHGC4Q9Y5F7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGC4Q9Y5F7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms