Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF6Q9Y252 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF6Q9Y252 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
RNF6Q9Y252 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF6Q9Y252 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF6Q9Y252 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF6Q9Y252 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF6Q9Y252 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF6Q9Y252 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RNF6Q9Y252 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF6Q9Y252 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 LINC01521-201ENST00000504184 1943 ntBASIC19.71■□□□□ 0.75
RNF6Q9Y252 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.71■□□□□ 0.75
RNF6Q9Y252 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF6Q9Y252 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF6Q9Y252 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF6Q9Y252 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF6Q9Y252 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF6Q9Y252 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.7■□□□□ 0.74
RNF6Q9Y252 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 AC004911.1-201ENST00000416316 871 ntBASIC19.7■□□□□ 0.74
RNF6Q9Y252 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 KRT18P14-201ENST00000534205 1250 ntBASIC19.7■□□□□ 0.74
RNF6Q9Y252 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF6Q9Y252 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF6Q9Y252 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 NTF6G-201ENST00000591094 616 ntBASIC19.69■□□□□ 0.74
RNF6Q9Y252 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF6Q9Y252 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF6Q9Y252 AC004687.1-201ENST00000579003 1625 ntBASIC19.69■□□□□ 0.74
RNF6Q9Y252 LINC02228-203ENST00000641970 1355 ntBASIC19.69■□□□□ 0.74
RNF6Q9Y252 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF6Q9Y252 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RNF6Q9Y252 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF6Q9Y252 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RNF6Q9Y252 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 AP005435.1-201ENST00000529293 1178 ntBASIC19.68■□□□□ 0.74
RNF6Q9Y252 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 TERF1P2-201ENST00000583350 1212 ntBASIC19.68■□□□□ 0.74
RNF6Q9Y252 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RNF6Q9Y252 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF6Q9Y252 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms