Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP2BQ9UQN3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.35■■□□□ 1.01
CHMP2BQ9UQN3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP2BQ9UQN3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP2BQ9UQN3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.35■■□□□ 1.01
CHMP2BQ9UQN3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.35■■□□□ 1.01
CHMP2BQ9UQN3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP2BQ9UQN3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.35■■□□□ 1.01
CHMP2BQ9UQN3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 UNC93B3-201ENST00000308076 687 ntBASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 AC133561.4-201ENST00000566112 224 ntBASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP2BQ9UQN3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.33■■□□□ 1.01
CHMP2BQ9UQN3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP2BQ9UQN3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
CHMP2BQ9UQN3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP2BQ9UQN3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHMP2BQ9UQN3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHMP2BQ9UQN3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHMP2BQ9UQN3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHMP2BQ9UQN3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 FEM1AP1-201ENST00000431297 1995 ntBASIC21.32■■□□□ 1
CHMP2BQ9UQN3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP2BQ9UQN3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 AC024257.2-201ENST00000549699 147 ntBASIC21.31■■□□□ 1
CHMP2BQ9UQN3 AC126544.1-201ENST00000580842 1059 ntBASIC21.31■■□□□ 1
CHMP2BQ9UQN3 AC233992.3-201ENST00000607491 485 ntBASIC21.31■■□□□ 1
CHMP2BQ9UQN3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.31■■□□□ 1
CHMP2BQ9UQN3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms