Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 AC026185.1-201ENST00000445748 174 ntBASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 MFSD11-216ENST00000590393 1141 ntBASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.93■□□□□ 0.94
SCN8AQ9UQD0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 AC008175.2-201ENST00000612840 297 ntBASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN8AQ9UQD0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN8AQ9UQD0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 MIR663A-201ENST00000385250 93 ntBASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 CNN2P6-201ENST00000439038 900 ntBASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 SLC7A5P2-201ENST00000553010 536 ntBASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 AL024507.2-201ENST00000606070 2574 ntBASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 FEM1AP4-201ENST00000443167 1987 ntBASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.9■□□□□ 0.94
SCN8AQ9UQD0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCN8AQ9UQD0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SCN8AQ9UQD0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SCN8AQ9UQD0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
SCN8AQ9UQD0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.89■□□□□ 0.94
SCN8AQ9UQD0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.89■□□□□ 0.93
SCN8AQ9UQD0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN8AQ9UQD0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN8AQ9UQD0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN8AQ9UQD0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms