Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 MYCNOS-205ENST00000641950 531 ntBASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 AL034346.1-201ENST00000568244 1277 ntBASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NPIPA1Q9UND3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPA1Q9UND3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 AC005181.1-201ENST00000604782 1256 ntBASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 AL121832.2-201ENST00000610979 668 ntBASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPA1Q9UND3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPA1Q9UND3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 AC010141.2-201ENST00000452426 721 ntBASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 AC083906.2-201ENST00000511578 360 ntBASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 AL050303.2-201ENST00000619798 666 ntBASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPA1Q9UND3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms