Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 AC098590.1-201ENST00000468126 897 ntBASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
HCFC1R1Q9NWW0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 AL355472.2-201ENST00000422958 438 ntBASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HCFC1R1Q9NWW0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 AC010542.4-201ENST00000563151 1910 ntBASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 C11orf96-202ENST00000528572 1834 ntBASIC21.94■■□□□ 1.1
HCFC1R1Q9NWW0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 AC091799.1-201ENST00000422823 811 ntBASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.93■■□□□ 1.1
HCFC1R1Q9NWW0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 KRT17P1-201ENST00000399211 1546 ntBASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC1R1Q9NWW0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC1R1Q9NWW0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HCFC1R1Q9NWW0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
HCFC1R1Q9NWW0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC1R1Q9NWW0 LSM12P1-201ENST00000411836 588 ntBASIC21.91■■□□□ 1.1
HCFC1R1Q9NWW0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.91■■□□□ 1.1
HCFC1R1Q9NWW0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC1R1Q9NWW0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 AC006058.3-201ENST00000606217 1069 ntBASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC1R1Q9NWW0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HCFC1R1Q9NWW0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
HCFC1R1Q9NWW0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HCFC1R1Q9NWW0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms