Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 AL136967.2-201ENST00000623968 743 ntBASIC19.55■□□□□ 0.72
RLIMQ9NVW2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 RASA4CP-201ENST00000424092 1398 ntBASIC19.55■□□□□ 0.72
RLIMQ9NVW2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.55■□□□□ 0.72
RLIMQ9NVW2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 AC105233.4-201ENST00000642045 216 ntBASIC19.54■□□□□ 0.72
RLIMQ9NVW2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RLIMQ9NVW2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RLIMQ9NVW2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 AC091305.1-201ENST00000479476 895 ntBASIC19.52■□□□□ 0.72
RLIMQ9NVW2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RLIMQ9NVW2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
RLIMQ9NVW2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
RLIMQ9NVW2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 SUDS3P1-201ENST00000505831 966 ntBASIC19.51■□□□□ 0.71
RLIMQ9NVW2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 AL139246.5-201ENST00000606645 996 ntBASIC19.51■□□□□ 0.71
RLIMQ9NVW2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RLIMQ9NVW2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms