Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 AL589743.5-201ENST00000616611 1050 ntBASIC19.88■□□□□ 0.77
CHD8Q9HCK8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 AC113410.3-201ENST00000623366 203 ntBASIC19.88■□□□□ 0.77
CHD8Q9HCK8 DUSP8P3-201ENST00000399571 1760 ntBASIC19.87■□□□□ 0.77
CHD8Q9HCK8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHD8Q9HCK8 AC026471.5-201ENST00000615068 467 ntBASIC19.87■□□□□ 0.77
CHD8Q9HCK8 AL023875.1-201ENST00000640777 796 ntBASIC19.87■□□□□ 0.77
CHD8Q9HCK8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 AC005521.1-201ENST00000393351 872 ntBASIC19.86■□□□□ 0.77
CHD8Q9HCK8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 KRT18P22-201ENST00000402024 1347 ntBASIC19.86■□□□□ 0.77
CHD8Q9HCK8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 TERF1P1-201ENST00000311003 1181 ntBASIC19.86■□□□□ 0.77
CHD8Q9HCK8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD8Q9HCK8 AL353803.4-201ENST00000565882 1934 ntBASIC19.85■□□□□ 0.77
CHD8Q9HCK8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 AC087388.1-201ENST00000571370 1112 ntBASIC19.85■□□□□ 0.77
CHD8Q9HCK8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 AC073508.3-201ENST00000619697 1419 ntBASIC19.85■□□□□ 0.77
CHD8Q9HCK8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.85■□□□□ 0.77
CHD8Q9HCK8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 AC005363.2-201ENST00000618631 242 ntBASIC19.84■□□□□ 0.77
CHD8Q9HCK8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 AC091076.1-201ENST00000610741 619 ntBASIC19.84■□□□□ 0.77
CHD8Q9HCK8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD8Q9HCK8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD8Q9HCK8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD8Q9HCK8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD8Q9HCK8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHD8Q9HCK8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.83■□□□□ 0.77
CHD8Q9HCK8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD8Q9HCK8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CHD8Q9HCK8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.83■□□□□ 0.77
CHD8Q9HCK8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.83■□□□□ 0.76
CHD8Q9HCK8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CHD8Q9HCK8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD8Q9HCK8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHD8Q9HCK8 DUX4L26-201ENST00000489078 1255 ntBASIC19.83■□□□□ 0.76
CHD8Q9HCK8 WWOX-216ENST00000569818 525 ntBASIC19.83■□□□□ 0.76
CHD8Q9HCK8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CHD8Q9HCK8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHD8Q9HCK8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.83■□□□□ 0.76
CHD8Q9HCK8 AL358472.4-201ENST00000633140 710 ntBASIC19.83■□□□□ 0.76
CHD8Q9HCK8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD8Q9HCK8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms