Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RC3H2Q9HBD1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RC3H2Q9HBD1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RC3H2Q9HBD1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RC3H2Q9HBD1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RC3H2Q9HBD1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 AL355472.2-201ENST00000422958 438 ntBASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RC3H2Q9HBD1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 AC093323.1-202ENST00000635031 2045 ntBASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 CYP2T3P-201ENST00000601990 817 ntBASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.59■■□□□ 1.21
RC3H2Q9HBD1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 UNC93B4-201ENST00000505679 747 ntBASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RC3H2Q9HBD1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RC3H2Q9HBD1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.2
RC3H2Q9HBD1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.2
RC3H2Q9HBD1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 AC060766.5-201ENST00000590539 871 ntBASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
RC3H2Q9HBD1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 HLA-B-256ENST00000639848 1089 ntBASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.56■■□□□ 1.2
RC3H2Q9HBD1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 AL359736.2-201ENST00000621992 437 ntBASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
RC3H2Q9HBD1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RC3H2Q9HBD1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms