Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 AC005229.4-201ENST00000610085 2198 ntBASIC19.44■□□□□ 0.7
ZNF559Q9BR84 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF559Q9BR84 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF559Q9BR84 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 TERF1P2-201ENST00000583350 1212 ntBASIC19.42■□□□□ 0.7
ZNF559Q9BR84 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 AC009237.3-201ENST00000393279 1427 ntBASIC19.42■□□□□ 0.7
ZNF559Q9BR84 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF559Q9BR84 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 HLA-L-209ENST00000420110 1011 ntBASIC19.41■□□□□ 0.7
ZNF559Q9BR84 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF559Q9BR84 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 AC105233.4-201ENST00000642045 216 ntBASIC19.4■□□□□ 0.7
ZNF559Q9BR84 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF559Q9BR84 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF559Q9BR84 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF559Q9BR84 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF559Q9BR84 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms