Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.59■□□□□ 0.57
PCNX1Q96RV3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 AL591742.1-201ENST00000604433 565 ntBASIC18.59■□□□□ 0.57
PCNX1Q96RV3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.59■□□□□ 0.57
PCNX1Q96RV3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCNX1Q96RV3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PCNX1Q96RV3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PCNX1Q96RV3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.58■□□□□ 0.57
PCNX1Q96RV3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.58■□□□□ 0.57
PCNX1Q96RV3 AP006294.2-201ENST00000641667 209 ntBASIC18.58■□□□□ 0.57
PCNX1Q96RV3 KRT17P1-201ENST00000399211 1546 ntBASIC18.58■□□□□ 0.57
PCNX1Q96RV3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCNX1Q96RV3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.58■□□□□ 0.56
PCNX1Q96RV3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCNX1Q96RV3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
PCNX1Q96RV3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCNX1Q96RV3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCNX1Q96RV3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 AC243732.1-201ENST00000612648 864 ntBASIC18.57■□□□□ 0.56
PCNX1Q96RV3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 AC003102.1-202ENST00000563394 1796 ntBASIC18.57■□□□□ 0.56
PCNX1Q96RV3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.57■□□□□ 0.56
PCNX1Q96RV3 AC061975.6-201ENST00000579045 1553 ntBASIC18.57■□□□□ 0.56
PCNX1Q96RV3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.56■□□□□ 0.56
PCNX1Q96RV3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.56■□□□□ 0.56
PCNX1Q96RV3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.55■□□□□ 0.56
PCNX1Q96RV3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 RPS2P4-201ENST00000476944 856 ntBASIC18.55■□□□□ 0.56
PCNX1Q96RV3 AC073648.6-201ENST00000641589 218 ntBASIC18.55■□□□□ 0.56
PCNX1Q96RV3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNX1Q96RV3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 MIR1224-201ENST00000408193 85 ntBASIC18.54■□□□□ 0.56
PCNX1Q96RV3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNX1Q96RV3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms