Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBGCP3Q96CW5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBGCP3Q96CW5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBGCP3Q96CW5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TUBGCP3Q96CW5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TUBGCP3Q96CW5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.33■□□□□ 0.85
TUBGCP3Q96CW5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.33■□□□□ 0.85
TUBGCP3Q96CW5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TUBGCP3Q96CW5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.33■□□□□ 0.85
TUBGCP3Q96CW5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.33■□□□□ 0.85
TUBGCP3Q96CW5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TUBGCP3Q96CW5 FEM1AP1-201ENST00000431297 1995 ntBASIC20.33■□□□□ 0.84
TUBGCP3Q96CW5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
TUBGCP3Q96CW5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TUBGCP3Q96CW5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TUBGCP3Q96CW5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.33■□□□□ 0.84
TUBGCP3Q96CW5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TUBGCP3Q96CW5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 SMUG1P1-201ENST00000590640 811 ntBASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.32■□□□□ 0.84
TUBGCP3Q96CW5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBGCP3Q96CW5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms