Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.94■■□□□ 1.42
USP6NLQ92738 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.94■■□□□ 1.42
USP6NLQ92738 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.94■■□□□ 1.42
USP6NLQ92738 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP6NLQ92738 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
USP6NLQ92738 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.94■■□□□ 1.42
USP6NLQ92738 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6NLQ92738 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6NLQ92738 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
USP6NLQ92738 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6NLQ92738 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6NLQ92738 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6NLQ92738 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.93■■□□□ 1.42
USP6NLQ92738 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.93■■□□□ 1.42
USP6NLQ92738 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.93■■□□□ 1.42
USP6NLQ92738 AL359736.2-201ENST00000621992 437 ntBASIC23.93■■□□□ 1.42
USP6NLQ92738 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.93■■□□□ 1.42
USP6NLQ92738 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6NLQ92738 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.93■■□□□ 1.42
USP6NLQ92738 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
USP6NLQ92738 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USP6NLQ92738 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
USP6NLQ92738 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USP6NLQ92738 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6NLQ92738 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USP6NLQ92738 AC091799.1-201ENST00000422823 811 ntBASIC23.92■■□□□ 1.42
USP6NLQ92738 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.92■■□□□ 1.42
USP6NLQ92738 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.92■■□□□ 1.42
USP6NLQ92738 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.92■■□□□ 1.42
USP6NLQ92738 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USP6NLQ92738 FAM21FP-204ENST00000608637 956 ntBASIC23.92■■□□□ 1.42
USP6NLQ92738 AC100791.3-201ENST00000617619 330 ntBASIC23.92■■□□□ 1.42
USP6NLQ92738 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USP6NLQ92738 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6NLQ92738 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6NLQ92738 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.92■■□□□ 1.42
USP6NLQ92738 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.92■■□□□ 1.42
USP6NLQ92738 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 AC139530.1-201ENST00000575312 1977 ntBASIC23.91■■□□□ 1.42
USP6NLQ92738 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.91■■□□□ 1.42
USP6NLQ92738 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.91■■□□□ 1.42
USP6NLQ92738 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 UBE2SP1-201ENST00000450587 669 ntBASIC23.91■■□□□ 1.42
USP6NLQ92738 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
USP6NLQ92738 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
USP6NLQ92738 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
USP6NLQ92738 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6NLQ92738 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.9■■□□□ 1.42
USP6NLQ92738 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.9■■□□□ 1.42
USP6NLQ92738 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP6NLQ92738 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
USP6NLQ92738 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP6NLQ92738 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.9■■□□□ 1.42
USP6NLQ92738 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
USP6NLQ92738 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
USP6NLQ92738 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
USP6NLQ92738 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
USP6NLQ92738 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
USP6NLQ92738 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
USP6NLQ92738 AC060766.5-201ENST00000590539 871 ntBASIC23.9■■□□□ 1.42
USP6NLQ92738 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
USP6NLQ92738 CYP2T3P-201ENST00000601990 817 ntBASIC23.9■■□□□ 1.42
USP6NLQ92738 HLA-B-256ENST00000639848 1089 ntBASIC23.9■■□□□ 1.42
USP6NLQ92738 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.9■■□□□ 1.42
USP6NLQ92738 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
USP6NLQ92738 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP6NLQ92738 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
USP6NLQ92738 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.89■■□□□ 1.42
USP6NLQ92738 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
USP6NLQ92738 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
USP6NLQ92738 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
USP6NLQ92738 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
USP6NLQ92738 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
USP6NLQ92738 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
USP6NLQ92738 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.89■■□□□ 1.41
USP6NLQ92738 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
USP6NLQ92738 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.89■■□□□ 1.41
USP6NLQ92738 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
USP6NLQ92738 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.89■■□□□ 1.41
USP6NLQ92738 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.89■■□□□ 1.41
USP6NLQ92738 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
USP6NLQ92738 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
USP6NLQ92738 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
USP6NLQ92738 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.89■■□□□ 1.41
USP6NLQ92738 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
USP6NLQ92738 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
USP6NLQ92738 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.88■■□□□ 1.41
USP6NLQ92738 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
USP6NLQ92738 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.88■■□□□ 1.41
USP6NLQ92738 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
USP6NLQ92738 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms