Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TM9SF4Q92544 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.8■□□□□ 0.76
TM9SF4Q92544 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.8■□□□□ 0.76
TM9SF4Q92544 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.8■□□□□ 0.76
TM9SF4Q92544 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.79■□□□□ 0.76
TM9SF4Q92544 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM9SF4Q92544 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TM9SF4Q92544 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.78■□□□□ 0.76
TM9SF4Q92544 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.78■□□□□ 0.76
TM9SF4Q92544 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF4Q92544 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TM9SF4Q92544 SLC25A24-204ENST00000569674 2357 ntBASIC19.78■□□□□ 0.76
TM9SF4Q92544 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF4Q92544 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF4Q92544 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF4Q92544 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF4Q92544 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.78■□□□□ 0.76
TM9SF4Q92544 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TM9SF4Q92544 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF4Q92544 AC087742.1-201ENST00000575880 1738 ntBASIC19.78■□□□□ 0.76
TM9SF4Q92544 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.78■□□□□ 0.76
TM9SF4Q92544 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TM9SF4Q92544 AC026310.3-201ENST00000625186 2373 ntBASIC19.78■□□□□ 0.76
TM9SF4Q92544 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF4Q92544 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM9SF4Q92544 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.77■□□□□ 0.76
TM9SF4Q92544 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.77■□□□□ 0.76
TM9SF4Q92544 AP001160.3-201ENST00000601484 763 ntBASIC19.77■□□□□ 0.76
TM9SF4Q92544 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM9SF4Q92544 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
TM9SF4Q92544 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.76■□□□□ 0.75
TM9SF4Q92544 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF4Q92544 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF4Q92544 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF4Q92544 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.76■□□□□ 0.75
TM9SF4Q92544 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF4Q92544 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF4Q92544 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF4Q92544 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM9SF4Q92544 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TM9SF4Q92544 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.76■□□□□ 0.75
TM9SF4Q92544 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.76■□□□□ 0.75
TM9SF4Q92544 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.76■□□□□ 0.75
TM9SF4Q92544 AL034346.1-201ENST00000568244 1277 ntBASIC19.76■□□□□ 0.75
TM9SF4Q92544 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.76■□□□□ 0.75
TM9SF4Q92544 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TM9SF4Q92544 UBE2DNL-204ENST00000602536 740 ntBASIC19.76■□□□□ 0.75
TM9SF4Q92544 AC005181.1-201ENST00000604782 1256 ntBASIC19.76■□□□□ 0.75
TM9SF4Q92544 MYCNOS-205ENST00000641950 531 ntBASIC19.76■□□□□ 0.75
TM9SF4Q92544 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM9SF4Q92544 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TM9SF4Q92544 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 SLC29A4P1-201ENST00000398760 971 ntBASIC19.75■□□□□ 0.75
TM9SF4Q92544 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 AC079089.2-201ENST00000531211 1277 ntBASIC19.75■□□□□ 0.75
TM9SF4Q92544 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM9SF4Q92544 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.75■□□□□ 0.75
TM9SF4Q92544 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms