Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC009299.2-201ENST00000482477 511 ntBASIC20.32■□□□□ 0.84
HIPK4Q8NE63 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.31■□□□□ 0.84
HIPK4Q8NE63 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 AC104564.3-201ENST00000582367 638 ntBASIC20.3■□□□□ 0.84
HIPK4Q8NE63 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.3■□□□□ 0.84
HIPK4Q8NE63 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 MIR6724-1-201ENST00000616420 92 ntBASIC20.29■□□□□ 0.84
HIPK4Q8NE63 MIR6724-2-201ENST00000616483 92 ntBASIC20.29■□□□□ 0.84
HIPK4Q8NE63 MIR6724-4-201ENST00000617390 92 ntBASIC20.29■□□□□ 0.84
HIPK4Q8NE63 MIR6724-3-201ENST00000622482 92 ntBASIC20.29■□□□□ 0.84
HIPK4Q8NE63 AL117332.1-201ENST00000622628 974 ntBASIC20.29■□□□□ 0.84
HIPK4Q8NE63 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.29■□□□□ 0.84
HIPK4Q8NE63 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
HIPK4Q8NE63 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 AC241377.3-202ENST00000626088 1088 ntBASIC20.27■□□□□ 0.84
HIPK4Q8NE63 AC241585.3-202ENST00000628937 1088 ntBASIC20.27■□□□□ 0.84
HIPK4Q8NE63 AC245100.8-202ENST00000629247 1058 ntBASIC20.27■□□□□ 0.84
HIPK4Q8NE63 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 AC138932.1-201ENST00000534164 6830 ntBASIC20.27■□□□□ 0.84
HIPK4Q8NE63 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.27■□□□□ 0.84
HIPK4Q8NE63 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
HIPK4Q8NE63 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIPK4Q8NE63 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.27■□□□□ 0.83
HIPK4Q8NE63 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HIPK4Q8NE63 AC087289.5-201ENST00000586076 3175 ntBASIC20.26■□□□□ 0.83
HIPK4Q8NE63 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK4Q8NE63 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.26■□□□□ 0.83
HIPK4Q8NE63 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms