Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 AC008175.2-201ENST00000612840 297 ntBASIC21.52■■□□□ 1.04
KDM1BQ8NB78 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
KDM1BQ8NB78 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.52■■□□□ 1.04
KDM1BQ8NB78 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KDM1BQ8NB78 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDM1BQ8NB78 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.52■■□□□ 1.04
KDM1BQ8NB78 AL137060.1-201ENST00000618151 2648 ntBASIC21.52■■□□□ 1.04
KDM1BQ8NB78 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
KDM1BQ8NB78 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.52■■□□□ 1.03
KDM1BQ8NB78 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.52■■□□□ 1.03
KDM1BQ8NB78 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 HLA-L-209ENST00000420110 1011 ntBASIC21.51■■□□□ 1.03
KDM1BQ8NB78 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 AC010536.3-201ENST00000620306 533 ntBASIC21.51■■□□□ 1.03
KDM1BQ8NB78 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDM1BQ8NB78 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.5■■□□□ 1.03
KDM1BQ8NB78 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.5■■□□□ 1.03
KDM1BQ8NB78 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 AC120498.10-201ENST00000621827 505 ntBASIC21.5■■□□□ 1.03
KDM1BQ8NB78 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.5■■□□□ 1.03
KDM1BQ8NB78 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 FBXW4P1-201ENST00000426721 2239 ntBASIC21.49■■□□□ 1.03
KDM1BQ8NB78 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM1BQ8NB78 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 MIR663A-201ENST00000385250 93 ntBASIC21.48■■□□□ 1.03
KDM1BQ8NB78 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KDM1BQ8NB78 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 AC013268.1-206ENST00000638368 961 ntBASIC21.47■■□□□ 1.03
KDM1BQ8NB78 AC112229.1-201ENST00000639295 961 ntBASIC21.47■■□□□ 1.03
KDM1BQ8NB78 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.47■■□□□ 1.03
KDM1BQ8NB78 KRT16P2-201ENST00000414673 1423 ntBASIC21.46■■□□□ 1.03
KDM1BQ8NB78 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.46■■□□□ 1.03
KDM1BQ8NB78 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM1BQ8NB78 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM1BQ8NB78 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM1BQ8NB78 AC003102.1-202ENST00000563394 1796 ntBASIC21.46■■□□□ 1.03
KDM1BQ8NB78 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM1BQ8NB78 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
KDM1BQ8NB78 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms