Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC9BQ8N6N2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.14■■□□□ 1.14
TTC9BQ8N6N2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TTC9BQ8N6N2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
TTC9BQ8N6N2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
TTC9BQ8N6N2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.14■■□□□ 1.14
TTC9BQ8N6N2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TTC9BQ8N6N2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.14■■□□□ 1.14
TTC9BQ8N6N2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC9BQ8N6N2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 ABHD17AP1-201ENST00000358206 933 ntBASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 AC069152.1-201ENST00000438030 544 ntBASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TTC9BQ8N6N2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 MKRN4P-201ENST00000444706 1521 ntBASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 AC243732.1-201ENST00000612648 864 ntBASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.12■■□□□ 1.13
TTC9BQ8N6N2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 CD99P1-205ENST00000527459 561 ntBASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 OR10C1-204ENST00000622521 1039 ntBASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.11■■□□□ 1.13
TTC9BQ8N6N2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 MIPEPP3-201ENST00000412105 444 ntBASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 AC069236.1-201ENST00000604339 616 ntBASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 AL591742.1-201ENST00000604433 565 ntBASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms