Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 MFSD11-216ENST00000590393 1141 ntBASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 AC120498.10-201ENST00000621827 505 ntBASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf40Q8IXQ3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 KRT16P2-201ENST00000414673 1423 ntBASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 AC011767.1-201ENST00000617410 1153 ntBASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf40Q8IXQ3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf40Q8IXQ3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.44■□□□□ 0.7
C9orf40Q8IXQ3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf40Q8IXQ3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms