Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 KRT18P14-201ENST00000534205 1250 ntBASIC19.67■□□□□ 0.74
CCDC71Q8IV32 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 NTF6G-201ENST00000591094 616 ntBASIC19.67■□□□□ 0.74
CCDC71Q8IV32 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71Q8IV32 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 LINC02228-203ENST00000641970 1355 ntBASIC19.66■□□□□ 0.74
CCDC71Q8IV32 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71Q8IV32 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.65■□□□□ 0.74
CCDC71Q8IV32 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC71Q8IV32 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC71Q8IV32 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
CCDC71Q8IV32 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 AP005435.1-201ENST00000529293 1178 ntBASIC19.64■□□□□ 0.73
CCDC71Q8IV32 AC105233.4-201ENST00000642045 216 ntBASIC19.64■□□□□ 0.73
CCDC71Q8IV32 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71Q8IV32 LINC01006-201ENST00000333319 2292 ntBASIC19.63■□□□□ 0.73
CCDC71Q8IV32 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 TERF1P2-201ENST00000583350 1212 ntBASIC19.63■□□□□ 0.73
CCDC71Q8IV32 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71Q8IV32 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC71Q8IV32 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms