Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.69■□□□□ 0.42
VPS13CQ709C8 AC069236.1-201ENST00000604339 616 ntBASIC17.69■□□□□ 0.42
VPS13CQ709C8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.69■□□□□ 0.42
VPS13CQ709C8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.69■□□□□ 0.42
VPS13CQ709C8 AC087742.1-201ENST00000575880 1738 ntBASIC17.69■□□□□ 0.42
VPS13CQ709C8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS13CQ709C8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VPS13CQ709C8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS13CQ709C8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VPS13CQ709C8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 AL355472.2-201ENST00000422958 438 ntBASIC17.68■□□□□ 0.42
VPS13CQ709C8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS13CQ709C8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS13CQ709C8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS13CQ709C8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS13CQ709C8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS13CQ709C8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
VPS13CQ709C8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS13CQ709C8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS13CQ709C8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VPS13CQ709C8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS13CQ709C8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VPS13CQ709C8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS13CQ709C8 FAM197Y4-202ENST00000622692 608 ntBASIC17.67■□□□□ 0.42
VPS13CQ709C8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS13CQ709C8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VPS13CQ709C8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS13CQ709C8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS13CQ709C8 AC003102.1-202ENST00000563394 1796 ntBASIC17.66■□□□□ 0.42
VPS13CQ709C8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS13CQ709C8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS13CQ709C8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VPS13CQ709C8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.66■□□□□ 0.42
VPS13CQ709C8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.66■□□□□ 0.42
VPS13CQ709C8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VPS13CQ709C8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS13CQ709C8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VPS13CQ709C8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS13CQ709C8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.66■□□□□ 0.42
VPS13CQ709C8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.66■□□□□ 0.42
VPS13CQ709C8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.66■□□□□ 0.42
VPS13CQ709C8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS13CQ709C8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS13CQ709C8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.65■□□□□ 0.42
VPS13CQ709C8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS13CQ709C8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS13CQ709C8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
VPS13CQ709C8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VPS13CQ709C8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VPS13CQ709C8 RPPH1-201ENST00000516869 333 ntBASIC17.65■□□□□ 0.42
VPS13CQ709C8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VPS13CQ709C8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS13CQ709C8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
VPS13CQ709C8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS13CQ709C8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS13CQ709C8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
VPS13CQ709C8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS13CQ709C8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
VPS13CQ709C8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
VPS13CQ709C8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
VPS13CQ709C8 AC061975.6-201ENST00000579045 1553 ntBASIC17.64■□□□□ 0.41
VPS13CQ709C8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS13CQ709C8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.64■□□□□ 0.41
VPS13CQ709C8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS13CQ709C8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS13CQ709C8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS13CQ709C8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS13CQ709C8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS13CQ709C8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS13CQ709C8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS13CQ709C8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS13CQ709C8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS13CQ709C8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS13CQ709C8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.63■□□□□ 0.41
VPS13CQ709C8 TSPY15P-201ENST00000457163 923 ntBASIC17.63■□□□□ 0.41
VPS13CQ709C8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS13CQ709C8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
VPS13CQ709C8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 KRT16P2-201ENST00000414673 1423 ntBASIC17.63■□□□□ 0.41
VPS13CQ709C8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS13CQ709C8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS13CQ709C8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS13CQ709C8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS13CQ709C8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms