Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 KRT18P35-201ENST00000510488 1269 ntBASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 MIR4785-201ENST00000585005 73 ntBASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 AP001412.1-201ENST00000608405 714 ntBASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 FAM21FP-204ENST00000608637 956 ntBASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 AL049637.2-201ENST00000641778 930 ntBASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PTCRAQ6ISU1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 ARMC10P1-201ENST00000313754 855 ntBASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 POM121L13P-201ENST00000422362 380 ntBASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 TSPY15P-201ENST00000457163 923 ntBASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 AC012306.2-201ENST00000609350 630 ntBASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTCRAQ6ISU1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PTCRAQ6ISU1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PTCRAQ6ISU1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PTCRAQ6ISU1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PTCRAQ6ISU1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PTCRAQ6ISU1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PTCRAQ6ISU1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PTCRAQ6ISU1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 TMPOP1-202ENST00000424642 1267 ntBASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
PTCRAQ6ISU1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PTCRAQ6ISU1 AC004812.2-201ENST00000611079 2094 ntBASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 AC061975.6-201ENST00000579045 1553 ntBASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.87■■□□□ 1.09
PTCRAQ6ISU1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCRAQ6ISU1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 MCRIP2P1-201ENST00000394346 511 ntBASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 CDV3P1-201ENST00000471403 739 ntBASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms