Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL121603.2-201ENST00000557373 2117 ntBASIC22■■□□□ 1.11
RNF43Q68DV7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF43Q68DV7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF43Q68DV7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF43Q68DV7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF43Q68DV7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RNF43Q68DV7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF43Q68DV7 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.99■■□□□ 1.11
RNF43Q68DV7 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF43Q68DV7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF43Q68DV7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF43Q68DV7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF43Q68DV7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF43Q68DV7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RNF43Q68DV7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF43Q68DV7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
RNF43Q68DV7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF43Q68DV7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF43Q68DV7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF43Q68DV7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF43Q68DV7 BID-214ENST00000617586 542 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF43Q68DV7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF43Q68DV7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF43Q68DV7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF43Q68DV7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF43Q68DV7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF43Q68DV7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF43Q68DV7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RNF43Q68DV7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF43Q68DV7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF43Q68DV7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF43Q68DV7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF43Q68DV7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF43Q68DV7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RNF43Q68DV7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RNF43Q68DV7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
RNF43Q68DV7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RNF43Q68DV7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF43Q68DV7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.95■■□□□ 1.1
RNF43Q68DV7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF43Q68DV7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF43Q68DV7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF43Q68DV7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RNF43Q68DV7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF43Q68DV7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 AC104187.1-201ENST00000607510 612 ntBASIC21.94■■□□□ 1.1
RNF43Q68DV7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms