Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19■□□□□ 0.63
RNFT1Q5M7Z0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 BX276092.2-201ENST00000417668 665 ntBASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 C11orf96-202ENST00000528572 1834 ntBASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNFT1Q5M7Z0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 AL162412.1-201ENST00000567129 965 ntBASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.98■□□□□ 0.63
RNFT1Q5M7Z0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 RARRES2P4-201ENST00000514074 484 ntBASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 AC092118.2-201ENST00000613495 667 ntBASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 AC010980.2-201ENST00000587099 1412 ntBASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.97■□□□□ 0.63
RNFT1Q5M7Z0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 AC068473.5-201ENST00000616428 2072 ntBASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNFT1Q5M7Z0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNFT1Q5M7Z0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms