Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP6AP1LQ52LC2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 AC133561.4-201ENST00000566112 224 ntBASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 AC233992.3-201ENST00000607491 485 ntBASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP6AP1LQ52LC2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.27■□□□□ 0.83
ATP6AP1LQ52LC2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.27■□□□□ 0.83
ATP6AP1LQ52LC2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP6AP1LQ52LC2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 UNC93B3-201ENST00000308076 687 ntBASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 AC126544.1-201ENST00000580842 1059 ntBASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP6AP1LQ52LC2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ATP6AP1LQ52LC2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6AP1LQ52LC2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6AP1LQ52LC2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6AP1LQ52LC2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms