Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC144BQ3MJ40 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.39■■□□□ 1.5
CCDC144BQ3MJ40 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC144BQ3MJ40 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC144BQ3MJ40 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CCDC144BQ3MJ40 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 AC231657.2-201ENST00000624556 255 ntBASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC144BQ3MJ40 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 AC010542.4-201ENST00000563151 1910 ntBASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 AC083906.2-201ENST00000511578 360 ntBASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 AL121832.2-201ENST00000610979 668 ntBASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC144BQ3MJ40 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 AP001160.3-201ENST00000601484 763 ntBASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC144BQ3MJ40 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 AC142086.2-201ENST00000569753 217 ntBASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 AC055733.4-201ENST00000638462 1354 ntBASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CCDC144BQ3MJ40 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 AC005229.4-201ENST00000610085 2198 ntBASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 AC007322.1-201ENST00000426983 750 ntBASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.35■■□□□ 1.49
CCDC144BQ3MJ40 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 TSPY6P-201ENST00000448518 926 ntBASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 AC005181.1-201ENST00000604782 1256 ntBASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 MYCNOS-205ENST00000641950 531 ntBASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.34■■□□□ 1.49
CCDC144BQ3MJ40 AC073130.3-201ENST00000624389 2278 ntBASIC24.33■■□□□ 1.49
CCDC144BQ3MJ40 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CCDC144BQ3MJ40 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC144BQ3MJ40 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC144BQ3MJ40 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC144BQ3MJ40 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC144BQ3MJ40 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC144BQ3MJ40 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms