Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SHROOM1Q2M3G4 AC068473.5-201ENST00000616428 2072 ntBASIC24.7■■□□□ 1.54
SHROOM1Q2M3G4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 AC069236.1-201ENST00000604339 616 ntBASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 AC066615.1-201ENST00000640911 628 ntBASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.69■■□□□ 1.54
SHROOM1Q2M3G4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 AL512625.2-201ENST00000417533 625 ntBASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 AC092118.2-201ENST00000613495 667 ntBASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 AC008694.1-202ENST00000636953 945 ntBASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 AC010980.2-201ENST00000587099 1412 ntBASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM1Q2M3G4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 AL591742.1-201ENST00000604433 565 ntBASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
SHROOM1Q2M3G4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 RARRES2P4-201ENST00000514074 484 ntBASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 AC243732.1-201ENST00000612648 864 ntBASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 MYC-209ENST00000641252 345 ntBASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.66■■□□□ 1.54
SHROOM1Q2M3G4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 AC008687.6-201ENST00000596318 630 ntBASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM1Q2M3G4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHROOM1Q2M3G4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.64■■□□□ 1.54
SHROOM1Q2M3G4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHROOM1Q2M3G4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
SHROOM1Q2M3G4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHROOM1Q2M3G4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHROOM1Q2M3G4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.64■■□□□ 1.54
SHROOM1Q2M3G4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SHROOM1Q2M3G4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SHROOM1Q2M3G4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SHROOM1Q2M3G4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.53
SHROOM1Q2M3G4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 AC091799.1-201ENST00000422823 811 ntBASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 AL355472.2-201ENST00000422958 438 ntBASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms