Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 RPL20BYOR312C 519 nt2.87□□□□□ -1.95
DDC1Q08949 BTS1YPL069C 1008 nt2.87□□□□□ -1.95
DDC1Q08949 snR44snR44 211 nt2.87□□□□□ -1.95
DDC1Q08949 SNQ2YDR011W 4506 nt2.87□□□□□ -1.95
DDC1Q08949 VPS9YML097C 1356 nt2.87□□□□□ -1.95
DDC1Q08949 RSN1YMR266W 2862 nt2.86□□□□□ -1.95
DDC1Q08949 MAK11YKL021C 1407 nt2.86□□□□□ -1.95
DDC1Q08949 SLS1YLR139C 1932 nt2.86□□□□□ -1.95
DDC1Q08949 YCR100CYCR100C 951 nt2.86□□□□□ -1.95
DDC1Q08949 PET100YDR079W 336 nt2.86□□□□□ -1.95
DDC1Q08949 HTA1YDR225W 399 nt2.86□□□□□ -1.95
DDC1Q08949 ERG25YGR060W 930 nt2.86□□□□□ -1.95
DDC1Q08949 PSF2YJL072C 642 nt2.86□□□□□ -1.95
DDC1Q08949 YMR099CYMR099C 894 nt2.86□□□□□ -1.95
DDC1Q08949 YPL276WYPL276W 438 nt2.86□□□□□ -1.95
DDC1Q08949 DUN1YDL101C 1542 nt2.86□□□□□ -1.95
DDC1Q08949 XRN1YGL173C 4587 nt2.86□□□□□ -1.95
DDC1Q08949 ERG11YHR007C 1593 nt2.86□□□□□ -1.95
DDC1Q08949 NDC80YIL144W 2076 nt2.86□□□□□ -1.95
DDC1Q08949 JSN1YJR091C 3276 nt2.85□□□□□ -1.95
DDC1Q08949 RSE1YML049C 4086 nt2.85□□□□□ -1.95
DDC1Q08949 DSE1YER124C 1722 nt2.85□□□□□ -1.95
DDC1Q08949 MSB2YGR014W 3921 nt2.85□□□□□ -1.95
DDC1Q08949 VPS33YLR396C 2076 nt2.85□□□□□ -1.95
DDC1Q08949 MPS2YGL075C 1164 nt2.85□□□□□ -1.95
DDC1Q08949 YGR111WYGR111W 1203 nt2.85□□□□□ -1.95
DDC1Q08949 RGI2YIL057C 495 nt2.85□□□□□ -1.95
DDC1Q08949 SSN8YNL025C 972 nt2.85□□□□□ -1.95
DDC1Q08949 YNL226WYNL226W 411 nt2.85□□□□□ -1.95
DDC1Q08949 YPR053CYPR053C 456 nt2.85□□□□□ -1.95
DDC1Q08949 YPR203WYPR203W 309 nt2.85□□□□□ -1.95
DDC1Q08949 POL30YBR088C 777 nt2.85□□□□□ -1.95
DDC1Q08949 BI3Q0115 1554 nt2.85□□□□□ -1.95
DDC1Q08949 YAT2YER024W 2772 nt2.84□□□□□ -1.95
DDC1Q08949 RIF1YBR275C 5751 nt2.84□□□□□ -1.95
DDC1Q08949 SEC15YGL233W 2733 nt2.84□□□□□ -1.95
DDC1Q08949 ARF1YDL192W 546 nt2.84□□□□□ -1.95
DDC1Q08949 YDR250CYDR250C 276 nt2.84□□□□□ -1.95
DDC1Q08949 YEL075CYEL075C 369 nt2.84□□□□□ -1.95
DDC1Q08949 RGI1YER067W 486 nt2.84□□□□□ -1.95
DDC1Q08949 YFR010W-AYFR010W-A 189 nt2.84□□□□□ -1.95
DDC1Q08949 YOR062CYOR062C 807 nt2.84□□□□□ -1.95
DDC1Q08949 GRX7YBR014C 612 nt2.84□□□□□ -1.95
DDC1Q08949 TUM1YOR251C 915 nt2.84□□□□□ -1.95
DDC1Q08949 DUF1YOL087C 3351 nt2.84□□□□□ -1.96
DDC1Q08949 CIN1YOR349W 3045 nt2.84□□□□□ -1.96
DDC1Q08949 UBP8YMR223W 1416 nt2.84□□□□□ -1.96
DDC1Q08949 BPT1YLL015W 4680 nt2.83□□□□□ -1.96
DDC1Q08949 UBC9YDL064W 474 nt2.83□□□□□ -1.96
DDC1Q08949 RRT13YER066W 558 nt2.83□□□□□ -1.96
DDC1Q08949 SEC28YIL076W 891 nt2.83□□□□□ -1.96
DDC1Q08949 YAL066WYAL066W 309 nt2.83□□□□□ -1.96
DDC1Q08949 REC102YLR329W 795 nt2.83□□□□□ -1.96
DDC1Q08949 JIP3YLR331C 378 nt2.83□□□□□ -1.96
DDC1Q08949 SEC14YMR079W 915 nt2.83□□□□□ -1.96
DDC1Q08949 AAR2YBL074C 1068 nt2.83□□□□□ -1.96
DDC1Q08949 HAT1YPL001W 1125 nt2.83□□□□□ -1.96
DDC1Q08949 VBA4YDR119W 2307 nt2.83□□□□□ -1.96
DDC1Q08949 GYP7YDL234C 2241 nt2.83□□□□□ -1.96
DDC1Q08949 CEP3YMR168C 1827 nt2.82□□□□□ -1.96
DDC1Q08949 YDR320W-BYDR320W-B 138 nt2.82□□□□□ -1.96
DDC1Q08949 LSM4YER112W 564 nt2.82□□□□□ -1.96
DDC1Q08949 YGL204CYGL204C 306 nt2.82□□□□□ -1.96
DDC1Q08949 BET5YML077W 480 nt2.82□□□□□ -1.96
DDC1Q08949 PEX15YOL044W 1152 nt2.82□□□□□ -1.96
DDC1Q08949 YBR116CYBR116C 528 nt2.82□□□□□ -1.96
DDC1Q08949 HBT1YDL223C 3141 nt2.82□□□□□ -1.96
DDC1Q08949 HSE1YHL002W 1359 nt2.82□□□□□ -1.96
DDC1Q08949 SLY41YOR307C 1362 nt2.82□□□□□ -1.96
DDC1Q08949 TAF2YCR042C 4224 nt2.82□□□□□ -1.96
DDC1Q08949 AI4Q0065 1671 nt2.82□□□□□ -1.96
DDC1Q08949 YHR078WYHR078W 1659 nt2.82□□□□□ -1.96
DDC1Q08949 GCD2YGR083C 1956 nt2.81□□□□□ -1.96
DDC1Q08949 YPP1YGR198W 2454 nt2.81□□□□□ -1.96
DDC1Q08949 YGR039WYGR039W 312 nt2.81□□□□□ -1.96
DDC1Q08949 YHR214C-DYHR214C-D 294 nt2.81□□□□□ -1.96
DDC1Q08949 tW(CCA)G1tW(CCA)G1 72 nt2.81□□□□□ -1.96
DDC1Q08949 COX3Q0275 810 nt2.81□□□□□ -1.96
DDC1Q08949 tW(CCA)G2tW(CCA)G2 72 nt2.81□□□□□ -1.96
DDC1Q08949 tW(CCA)JtW(CCA)J 72 nt2.81□□□□□ -1.96
DDC1Q08949 tW(CCA)KtW(CCA)K 72 nt2.81□□□□□ -1.96
DDC1Q08949 tW(CCA)MtW(CCA)M 72 nt2.81□□□□□ -1.96
DDC1Q08949 tW(CCA)PtW(CCA)P 72 nt2.81□□□□□ -1.96
DDC1Q08949 RFA3YJL173C 369 nt2.81□□□□□ -1.96
DDC1Q08949 YKR033CYKR033C 426 nt2.81□□□□□ -1.96
DDC1Q08949 YAR069CYAR069C 294 nt2.81□□□□□ -1.96
DDC1Q08949 HHF2YNL030W 312 nt2.81□□□□□ -1.96
DDC1Q08949 THI80YOR143C 960 nt2.81□□□□□ -1.96
DDC1Q08949 YOR203WYOR203W 354 nt2.81□□□□□ -1.96
DDC1Q08949 TYE7YOR344C 876 nt2.81□□□□□ -1.96
DDC1Q08949 SAD1YFR005C 1347 nt2.81□□□□□ -1.96
DDC1Q08949 SLP1YOR154W 1764 nt2.81□□□□□ -1.96
DDC1Q08949 NFT1YKR103W 3657 nt2.81□□□□□ -1.96
DDC1Q08949 YPL150WYPL150W 2706 nt2.8□□□□□ -1.96
DDC1Q08949 UBP14YBR058C 2346 nt2.8□□□□□ -1.96
DDC1Q08949 CDC5YMR001C 2118 nt2.8□□□□□ -1.96
DDC1Q08949 SRB8YCR081W 4284 nt2.8□□□□□ -1.96
DDC1Q08949 THO1YER063W 657 nt2.8□□□□□ -1.96
DDC1Q08949 RPL22BYFL034C-A 369 nt2.8□□□□□ -1.96
DDC1Q08949 YGL117WYGL117W 798 nt2.8□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms