Protein–RNA interactions for Protein: Q03612

TY1B-ER1, Transposon Ty1-ER1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-ER1Q03612 MEC1YBR136W 7107 nt2.4□□□□□ -2.02
TY1B-ER1Q03612 PFD1YJL179W 330 nt2.4□□□□□ -2.03
TY1B-ER1Q03612 YJR023CYJR023C 402 nt2.4□□□□□ -2.03
TY1B-ER1Q03612 DID4YKL002W 699 nt2.4□□□□□ -2.03
TY1B-ER1Q03612 DAD2YKR083C 402 nt2.4□□□□□ -2.03
TY1B-ER1Q03612 DSE3YOR264W 1293 nt2.4□□□□□ -2.03
TY1B-ER1Q03612 DAD3YBR233W-A 285 nt2.4□□□□□ -2.03
TY1B-ER1Q03612 LDB17YDL146W 1476 nt2.4□□□□□ -2.03
TY1B-ER1Q03612 HSL1YKL101W 4557 nt2.4□□□□□ -2.03
TY1B-ER1Q03612 GEA2YEL022W 4380 nt2.39□□□□□ -2.03
TY1B-ER1Q03612 LAP3YNL239W 1365 nt2.39□□□□□ -2.03
TY1B-ER1Q03612 SMI1YGR229C 1518 nt2.39□□□□□ -2.03
TY1B-ER1Q03612 HMO1YDR174W 741 nt2.38□□□□□ -2.03
TY1B-ER1Q03612 PHS1YJL097W 654 nt2.38□□□□□ -2.03
TY1B-ER1Q03612 SPO20YMR017W 1194 nt2.38□□□□□ -2.03
TY1B-ER1Q03612 RPS30BYOR182C 192 nt2.38□□□□□ -2.03
TY1B-ER1Q03612 SSF1YHR066W 1362 nt2.38□□□□□ -2.03
TY1B-ER1Q03612 SOK2YMR016C 2358 nt2.38□□□□□ -2.03
TY1B-ER1Q03612 TOR2YKL203C 7425 nt2.38□□□□□ -2.03
TY1B-ER1Q03612 YGL176CYGL176C 1665 nt2.37□□□□□ -2.03
TY1B-ER1Q03612 YDR261W-BYDR261W-B 5313 nt2.37□□□□□ -2.03
TY1B-ER1Q03612 DNF3YMR162C 4971 nt2.37□□□□□ -2.03
TY1B-ER1Q03612 CPR5YDR304C 678 nt2.37□□□□□ -2.03
TY1B-ER1Q03612 YOR146WYOR146W 306 nt2.37□□□□□ -2.03
TY1B-ER1Q03612 RRI1YDL216C 1323 nt2.36□□□□□ -2.03
TY1B-ER1Q03612 ENV10YLR065C 546 nt2.36□□□□□ -2.03
TY1B-ER1Q03612 POC4YPL144W 447 nt2.36□□□□□ -2.03
TY1B-ER1Q03612 YLR419WYLR419W 4308 nt2.36□□□□□ -2.03
TY1B-ER1Q03612 RSM25YIL093C 795 nt2.36□□□□□ -2.03
TY1B-ER1Q03612 AIM23YJL131C 1071 nt2.36□□□□□ -2.03
TY1B-ER1Q03612 COQ9YLR201C 783 nt2.36□□□□□ -2.03
TY1B-ER1Q03612 PGS1YCL004W 1566 nt2.36□□□□□ -2.03
TY1B-ER1Q03612 YDR210W-BYDR210W-B 5313 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 PAU2YEL049W 363 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 PAU12YGR294W 363 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 PAU18YLL064C 363 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 PDR8YLR266C 2106 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 CPR8YNR028W 927 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 PAU6YNR076W 363 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 PAU24YBR301W 363 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 HDA2YDR295C 2025 nt2.35□□□□□ -2.03
TY1B-ER1Q03612 RNY1YPL123C 1305 nt2.34□□□□□ -2.03
TY1B-ER1Q03612 SEC65YML105C 822 nt2.34□□□□□ -2.03
TY1B-ER1Q03612 PHO2YDL106C 1680 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 MED2YDL005C 1296 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 SWC4YGR002C 1431 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 MSH5YDL154W 2706 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 TRZ1YKR079C 2517 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 ISW1YBR245C 3390 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 OKP1YGR179C 1221 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 LSM1YJL124C 519 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 RPS1AYLR441C 768 nt2.33□□□□□ -2.04
TY1B-ER1Q03612 UTP21YLR409C 2820 nt2.32□□□□□ -2.04
TY1B-ER1Q03612 YJU2YKL095W 837 nt2.32□□□□□ -2.04
TY1B-ER1Q03612 ATP11YNL315C 957 nt2.32□□□□□ -2.04
TY1B-ER1Q03612 HUA2YOR284W 732 nt2.32□□□□□ -2.04
TY1B-ER1Q03612 YPR027CYPR027C 834 nt2.32□□□□□ -2.04
TY1B-ER1Q03612 MDM10YAL010C 1482 nt2.32□□□□□ -2.04
TY1B-ER1Q03612 CWC22YGR278W 1734 nt2.31□□□□□ -2.04
TY1B-ER1Q03612 HMT1YBR034C 1047 nt2.31□□□□□ -2.04
TY1B-ER1Q03612 TOP1YOL006C 2310 nt2.31□□□□□ -2.04
TY1B-ER1Q03612 NOP14YDL148C 2433 nt2.31□□□□□ -2.04
TY1B-ER1Q03612 NAN1YPL126W 2691 nt2.31□□□□□ -2.04
TY1B-ER1Q03612 NRP1YDL167C 2160 nt2.31□□□□□ -2.04
TY1B-ER1Q03612 TRX1YLR043C 312 nt2.31□□□□□ -2.04
TY1B-ER1Q03612 YOL057WYOL057W 2136 nt2.3□□□□□ -2.04
TY1B-ER1Q03612 PHO12YHR215W 1404 nt2.3□□□□□ -2.04
TY1B-ER1Q03612 PHO11YAR071W 1404 nt2.3□□□□□ -2.04
TY1B-ER1Q03612 SRG1SRG1 551 nt2.3□□□□□ -2.04
TY1B-ER1Q03612 SMX2YFL017W-A 234 nt2.3□□□□□ -2.04
TY1B-ER1Q03612 SWD3YBR175W 948 nt2.3□□□□□ -2.04
TY1B-ER1Q03612 ROM2YLR371W 4071 nt2.3□□□□□ -2.04
TY1B-ER1Q03612 CTF13YMR094W 1437 nt2.29□□□□□ -2.04
TY1B-ER1Q03612 YJR056CYJR056C 711 nt2.29□□□□□ -2.04
TY1B-ER1Q03612 REC102YLR329W 795 nt2.29□□□□□ -2.04
TY1B-ER1Q03612 ATG34YOL083W 1239 nt2.29□□□□□ -2.04
TY1B-ER1Q03612 IRE1YHR079C 3348 nt2.29□□□□□ -2.04
TY1B-ER1Q03612 MAK10YEL053C 2202 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 YDR401WYDR401W 564 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 YFR045WYFR045W 930 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 YGR293CYGR293C 462 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 YML094C-AYML094C-A 402 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 RRP7YCL031C 894 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 MSM1YGR171C 1728 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 GNT1YOR320C 1476 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 PRP6YBR055C 2700 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 GPP2YER062C 753 nt2.28□□□□□ -2.04
TY1B-ER1Q03612 VBA4YDR119W 2307 nt2.27□□□□□ -2.05
TY1B-ER1Q03612 CSF1YLR087C 8877 nt2.27□□□□□ -2.05
TY1B-ER1Q03612 SDP1YIL113W 630 nt2.27□□□□□ -2.05
TY1B-ER1Q03612 CFT2YLR115W 2580 nt2.27□□□□□ -2.05
TY1B-ER1Q03612 TMA64YDR117C 1698 nt2.27□□□□□ -2.05
TY1B-ER1Q03612 RIM13YMR154C 2184 nt2.27□□□□□ -2.05
TY1B-ER1Q03612 YOR192C-BYOR192C-B 5313 nt2.26□□□□□ -2.05
TY1B-ER1Q03612 FIN1YDR130C 876 nt2.26□□□□□ -2.05
TY1B-ER1Q03612 HHF2YNL030W 312 nt2.26□□□□□ -2.05
TY1B-ER1Q03612 YHR095WYHR095W 495 nt2.25□□□□□ -2.05
TY1B-ER1Q03612 NNT1YLR285W 786 nt2.25□□□□□ -2.05
TY1B-ER1Q03612 YLR462WYLR462W 609 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms