Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.88■□□□□ 0.29
PAX9P55771 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.88■□□□□ 0.29
PAX9P55771 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 RARRES2P1-201ENST00000474487 481 ntBASIC16.88■□□□□ 0.29
PAX9P55771 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.88■□□□□ 0.29
PAX9P55771 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.88■□□□□ 0.29
PAX9P55771 AC087239.1-201ENST00000622671 572 ntBASIC16.88■□□□□ 0.29
PAX9P55771 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.88■□□□□ 0.29
PAX9P55771 AP004607.7-201ENST00000527152 1677 ntBASIC16.88■□□□□ 0.29
PAX9P55771 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PAX9P55771 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.87■□□□□ 0.29
PAX9P55771 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.87■□□□□ 0.29
PAX9P55771 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PAX9P55771 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.87■□□□□ 0.29
PAX9P55771 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 OR2I1P-207ENST00000453522 948 ntBASIC16.87■□□□□ 0.29
PAX9P55771 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 AC020907.5-201ENST00000624372 1936 ntBASIC16.87■□□□□ 0.29
PAX9P55771 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
PAX9P55771 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.87■□□□□ 0.29
PAX9P55771 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PAX9P55771 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PAX9P55771 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.86■□□□□ 0.29
PAX9P55771 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PAX9P55771 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PAX9P55771 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
PAX9P55771 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.86■□□□□ 0.29
PAX9P55771 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 KRT125P-201ENST00000546827 989 ntBASIC16.86■□□□□ 0.29
PAX9P55771 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.86■□□□□ 0.29
PAX9P55771 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.86■□□□□ 0.29
PAX9P55771 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAX9P55771 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.86■□□□□ 0.29
PAX9P55771 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.86■□□□□ 0.29
PAX9P55771 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PAX9P55771 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
PAX9P55771 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.86■□□□□ 0.29
PAX9P55771 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.85■□□□□ 0.29
PAX9P55771 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.85■□□□□ 0.29
PAX9P55771 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAX9P55771 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAX9P55771 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAX9P55771 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PAX9P55771 MIR4787-201ENST00000607364 84 ntBASIC16.85■□□□□ 0.29
PAX9P55771 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PAX9P55771 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.85■□□□□ 0.29
PAX9P55771 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PAX9P55771 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PAX9P55771 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAX9P55771 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PAX9P55771 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PAX9P55771 AC121338.2-201ENST00000622535 1744 ntBASIC16.84■□□□□ 0.29
PAX9P55771 AC007225.1-201ENST00000566331 1836 ntBASIC16.84■□□□□ 0.29
PAX9P55771 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PAX9P55771 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
PAX9P55771 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
PAX9P55771 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PAX9P55771 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.84■□□□□ 0.29
PAX9P55771 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.84■□□□□ 0.29
PAX9P55771 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.84■□□□□ 0.29
PAX9P55771 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PAX9P55771 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PAX9P55771 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.84■□□□□ 0.29
PAX9P55771 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PAX9P55771 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.84■□□□□ 0.29
PAX9P55771 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PAX9P55771 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PAX9P55771 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PAX9P55771 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PAX9P55771 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PAX9P55771 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.84■□□□□ 0.29
PAX9P55771 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
PAX9P55771 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX9P55771 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX9P55771 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX9P55771 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX9P55771 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX9P55771 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX9P55771 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
PAX9P55771 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX9P55771 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms