Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.86■□□□□ 0.61
CASP6P55212 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.86■□□□□ 0.61
CASP6P55212 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CASP6P55212 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CASP6P55212 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.86■□□□□ 0.61
CASP6P55212 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.86■□□□□ 0.61
CASP6P55212 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.86■□□□□ 0.61
CASP6P55212 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CASP6P55212 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.86■□□□□ 0.61
CASP6P55212 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.86■□□□□ 0.61
CASP6P55212 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASP6P55212 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CASP6P55212 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CASP6P55212 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 AIRN-201ENST00000601203 4374 ntBASIC18.85■□□□□ 0.61
CASP6P55212 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CASP6P55212 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CASP6P55212 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.85■□□□□ 0.61
CASP6P55212 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.85■□□□□ 0.61
CASP6P55212 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.85■□□□□ 0.61
CASP6P55212 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.85■□□□□ 0.61
CASP6P55212 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.85■□□□□ 0.61
CASP6P55212 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.85■□□□□ 0.61
CASP6P55212 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CASP6P55212 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CASP6P55212 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASP6P55212 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP6P55212 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP6P55212 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.84■□□□□ 0.61
CASP6P55212 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP6P55212 ESRRAP1-201ENST00000400596 1257 ntBASIC18.84■□□□□ 0.61
CASP6P55212 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.84■□□□□ 0.61
CASP6P55212 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASP6P55212 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASP6P55212 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CASP6P55212 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASP6P55212 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP6P55212 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.83■□□□□ 0.6
CASP6P55212 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CASP6P55212 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP6P55212 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP6P55212 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASP6P55212 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.82■□□□□ 0.6
CASP6P55212 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.82■□□□□ 0.6
CASP6P55212 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CASP6P55212 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 PRORSD1P-201ENST00000295112 541 ntBASIC18.82■□□□□ 0.6
CASP6P55212 LSM12P1-201ENST00000411836 588 ntBASIC18.82■□□□□ 0.6
CASP6P55212 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.82■□□□□ 0.6
CASP6P55212 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CASP6P55212 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.82■□□□□ 0.6
CASP6P55212 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.82■□□□□ 0.6
CASP6P55212 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 AC243732.1-201ENST00000612648 864 ntBASIC18.82■□□□□ 0.6
CASP6P55212 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP6P55212 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP6P55212 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP6P55212 AC010980.2-201ENST00000587099 1412 ntBASIC18.82■□□□□ 0.6
CASP6P55212 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP6P55212 RBM17P2-201ENST00000616397 1405 ntBASIC18.82■□□□□ 0.6
CASP6P55212 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP6P55212 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms