Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC068587.7-201ENST00000641602 218 ntBASIC21.65■■□□□ 1.06
PMS2P54278 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.65■■□□□ 1.06
PMS2P54278 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.65■■□□□ 1.06
PMS2P54278 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PMS2P54278 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
PMS2P54278 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PMS2P54278 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.64■■□□□ 1.05
PMS2P54278 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.64■■□□□ 1.05
PMS2P54278 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS2P54278 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PMS2P54278 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS2P54278 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS2P54278 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.64■■□□□ 1.05
PMS2P54278 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS2P54278 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS2P54278 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS2P54278 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS2P54278 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS2P54278 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.63■■□□□ 1.05
PMS2P54278 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.63■■□□□ 1.05
PMS2P54278 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PMS2P54278 AC003102.1-202ENST00000563394 1796 ntBASIC21.63■■□□□ 1.05
PMS2P54278 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.63■■□□□ 1.05
PMS2P54278 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS2P54278 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS2P54278 AP005212.1-201ENST00000581547 1997 ntBASIC21.63■■□□□ 1.05
PMS2P54278 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
PMS2P54278 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.62■■□□□ 1.05
PMS2P54278 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.62■■□□□ 1.05
PMS2P54278 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.62■■□□□ 1.05
PMS2P54278 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS2P54278 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PMS2P54278 ZNRF2P3-201ENST00000424200 374 ntBASIC21.62■■□□□ 1.05
PMS2P54278 pRNA.6-201ENST00000610482 90 ntBASIC21.62■■□□□ 1.05
PMS2P54278 pRNA.5-201ENST00000612139 90 ntBASIC21.62■■□□□ 1.05
PMS2P54278 pRNA.11-201ENST00000618423 90 ntBASIC21.62■■□□□ 1.05
PMS2P54278 pRNA.13-201ENST00000619112 90 ntBASIC21.62■■□□□ 1.05
PMS2P54278 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.62■■□□□ 1.05
PMS2P54278 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PMS2P54278 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS2P54278 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS2P54278 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PMS2P54278 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS2P54278 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS2P54278 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.62■■□□□ 1.05
PMS2P54278 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS2P54278 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS2P54278 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PMS2P54278 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS2P54278 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS2P54278 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.61■■□□□ 1.05
PMS2P54278 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.61■■□□□ 1.05
PMS2P54278 UNC93B3-201ENST00000308076 687 ntBASIC21.61■■□□□ 1.05
PMS2P54278 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.61■■□□□ 1.05
PMS2P54278 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PMS2P54278 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS2P54278 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PMS2P54278 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PMS2P54278 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS2P54278 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS2P54278 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.61■■□□□ 1.05
PMS2P54278 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.61■■□□□ 1.05
PMS2P54278 AC006128.1-201ENST00000624704 1661 ntBASIC21.6■■□□□ 1.05
PMS2P54278 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS2P54278 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS2P54278 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS2P54278 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PMS2P54278 SRD5A1P1-201ENST00000442297 786 ntBASIC21.6■■□□□ 1.05
PMS2P54278 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PMS2P54278 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.6■■□□□ 1.05
PMS2P54278 AL136162.1-201ENST00000607711 1078 ntBASIC21.6■■□□□ 1.05
PMS2P54278 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.6■■□□□ 1.05
PMS2P54278 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS2P54278 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS2P54278 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS2P54278 AC073314.1-201ENST00000568729 2216 ntBASIC21.6■■□□□ 1.05
PMS2P54278 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.59■■□□□ 1.05
PMS2P54278 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 AC006455.2-201ENST00000429931 906 ntBASIC21.59■■□□□ 1.05
PMS2P54278 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.59■■□□□ 1.05
PMS2P54278 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 AC087239.1-201ENST00000622671 572 ntBASIC21.59■■□□□ 1.05
PMS2P54278 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PMS2P54278 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.59■■□□□ 1.05
PMS2P54278 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.59■■□□□ 1.05
PMS2P54278 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PMS2P54278 AC135279.3-201ENST00000610945 1311 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms